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15-3056-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 344883 [Map]; Strand: w
      • AT1G01990.1 - [+] show detail - unknown protein; Has 32 Blast hits to 32 proteins in 6 species: Archae - 0; B...
        Distance: -542; Region: promoter
      • AT1G02000.1 - [+] show detail - UDP-D-glucuronate 4-epimerase 2
        Distance: -929; Region: promoter
    Flanking Genome Sequence: 15-3056-1 - 5-prime edge 
    CGTGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCAGGTT CACTAATGTT TTGTAATATG GTAAAAAAAT 
    TATATAATCT CAATATCTCG A

AT1G01990.1

Model type
Protein coding
Computational Description
unknown protein; Has 32 Blast hits to 32 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G02000.1

Model type
Protein coding
Short Description
UDP-D-glucuronate 4-epimerase 2
Curator Summary
UDP-D-glucuronate 4-epimerase
Computational Description
UDP-D-glucuronate 4-epimerase 2 (GAE2); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 3 (TAIR:AT4G00110.1); Has 43438 Blast hits to 43429 proteins in 2985 species: Archae - 785; Bacteria - 25993; Metazoa - 728; Fungi - 385; Plants - 1220; Viruses - 41; Other Eukaryotes - 14286 (source: NCBI BLink).
Link
InterPro Scan - TAIR