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15-3061-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 206420 [Map]; Strand: w
      • AT2G01460.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: exon2 (CDS)
      • AT2G01460.2 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 15-3061-1 - 5-prime edge 
    TCTGTTGGTG AAGTCCATTC AAGAGCTTAG AGAGAAGAAG GACGGCATTG 
    TTACTGTTGG TATTGGTGGA CCTAGCGGCT CTGGTAAATC TAGGTAATCC 
    ATCGTTTATG TTTAGTGTCG AATTTCTCAA GAGGCATGCT CGATTTCATG 
    GTTTTTTGTT TGGTTGCACG AAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 206308 [Map]; Strand: w
      • AT2G01460.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: intron1 (CDS)
      • AT2G01460.2 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 15-3061-1 - 3-prime edge 
    CCNATNGCAC NTCNGACNCG NTTCNNNAGC NNCANGGCNN NCGCNNATGA 
    NTGATGTTCT TGAACTNGTN AATTTTTGTG GAAATTATNG AAAGGGAGAA 
    GAAGCNGNTC CACTNNNAAN ANGAAGAGAT TGAAGAATCG GANCAAGAGG 
    AANAAGAAGT TGAAGGTTGT TGCTGGAAGA AATCTCGTCC TCCTTCTNGG 
    AAAACTCGCT GAACAACCTC GN

AT2G01460.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, kinase activity, nucleotide binding, phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), ATPase, AAA+ type, core (InterPro:IPR003593), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G26190.1); Has 3953 Blast hits to 3156 proteins in 1342 species: Archae - 38; Bacteria - 3073; Metazoa - 244; Fungi - 122; Plants - 227; Viruses - 4; Other Eukaryotes - 245 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01460.2

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, kinase activity, phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G26190.1).
Link
InterPro Scan - TAIR