1. Home
  2. Mutant Lines
  3. 15-3087-1

15-3087-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7229443 [Map]; Strand: c
      • AT1G20800.1 - [+] show detail - F-box family protein
        Distance: 0; Region: exon2 (CDS)
      • AT1G20800.2 - [+] show detail - F-box family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 15-3087-1 - 3-prime edge 
    TTAGGATCGA TAAGAATAGC CTCGAGGGAA TAAACGTTAA TCGATTCCTC 
    CGTCGCTGAT ATCAATGCTA GTTCCTTCTC TGTGGCCTCG AACAAGAACT 
    TGTTCGCCAC CGCGCTTAGT TCTAGGGGAA ACTTGATTGG AATCAGCCGT 
    GCNTTGCTCT GTTTCTGGAT TGAATGCTAA AATGCTTCCG TCCTTTCTCA 
    ACCAGTGAAT ACAACCGTCA AAGTAAACCG GTTTCTTATC AGCCAGGGGA 
    ACACNTTGGG TTGCAAGTAA TAGTCGTTTC CGACAATCTC CAACAGGAAT 
    CTCCTGTGGT AATCTCGAAT TGATACACAT GGTTTGGTCT GGATTCGAAG 
    ACGTTGTATC TTTCATGCAG ACAACTTTGA ATCCCTGACT TGTTCTATCA 
    ATTTGATCAA CCGCAAAACC AATGCGATTC ATTTTATGAC TTCGTAGGTT 
    AAAGCT

AT1G20800.1

Model type
Protein coding
Short Description
F-box family protein
Curator Summary
F-box family protein
Computational Description
F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G20795.1); Has 109 Blast hits to 52 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G20800.2

Model type
Protein coding
Short Description
F-box family protein
Curator Summary
F-box family protein
Computational Description
F-box family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G20795.1).
Link
InterPro Scan - TAIR