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15-3090-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11585402 [Map]; Strand: c
      • AT1G32172.1 - [+] show detail - other RNA
        Distance: 4855; Region: intergenic
      • AT1G32180.1 - [+] show detail - cellulose synthase-like D6
        Distance: 1114; Region: intergenic
    Flanking Genome Sequence: 15-3090-1 - 5-prime edge 
    CTTTAAAAAC TAACAAAATC GGTTATNCGA TAACGGTCGG TACGGGATAA 
    CAAAATCNTA AATCTACGTG TNCTTTGTGT CGAAGAATCA CATAAATAGC 
    TGATTNTCGC AACGTAAACT CTTCTTCCAC AAATAAACCG TCAACGAATA 
    TTCAAATTTC AAAATTCATT TCTAATTTCT TCAAAACGAG TTTGAATTTG 
    AGTGGAGAAG CGATTTTGTT CGTCTATCTT CTTCTGAATC TTTTCTCCGA 
    TCAATTGAAT TTCATGTTCA ATGGCGTCTG ATTCGTTGGG CTAGTTCAAA 
    TCGGAATCCA AGGGTTTCGA TTTTGGGTCG GTGATAATCC AACGATGGAT 
    ACACGGATTG GATTTGGATC GTGTGATAGT ACTACCAAAT TGAAGAAGGT 
    GCGCAAGATT TCGATCAGTG TGTATGTTGA TTTGGGAATT TAGGGTTTTA 
    GTTTTGAAAT TGTTTGCTTG ATTTCTGTTG GAATTTAGTT GTTTTTGATG 
    GTTATGAGAT CTACCAATTA GGATAATCGC GTACATGGAT TTATAAAGAG 
    TGATCATAAG AGTTTAATGT TATGGAATTG TTTCATCAAA CTTCTCTGTT 
    ATTTTGTTCA AGTAGATGAG TTTAAATTGT TTCATCATCA GTCGATCACT 
    GTTNCAATTT ATGTTTGTTG CCTANATGAT GCATTGGAGT CTCTTTTTAT 
    CCTCTTAATG GGNTCTCTGC CGTTTTGGTT CCTNATGCGT GANATGGTCT 
    CTGAAGNTAT GNNTTCAANN TGGATCTTNG N

AT1G32172.1

Model type
Other RNA
Short Description
other RNA
Link
InterPro Scan - TAIR

AT1G32180.1

Model type
Protein coding
Short Description
cellulose synthase-like D6
Curator Summary
encodes a gene similar to cellulose synthase
Computational Description
cellulose synthase-like D6 (CSLD6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose-synthase like D2 (TAIR:AT5G16910.1); Has 3332 Blast hits to 2680 proteins in 615 species: Archae - 13; Bacteria - 1453; Metazoa - 5; Fungi - 21; Plants - 1756; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink).
Link
InterPro Scan - TAIR