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15-3119-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 1243208 [Map]; Strand: w
      • AT5G04400.1 - [+] show detail - NAC domain containing protein 77
        Distance: 0; Region: exon4 (CDS)
      • AT5G04410.1 - [+] show detail - NAC domain containing protein 2
        Distance: -550; Region: promoter
    Flanking Genome Sequence: 15-3119-1 - 5-prime edge 
    AAAGAAACTC CATCACCTCT CAAATATATG ATCGATGATC TGGAGAAGGA 
    ACAAGAACCA GCCACCAAGA GGATCAACGA TCTGGTACTG AAGGAGAATG 
    ACGAGATAGT TGTGTTCAGA GAGATGCAAG AGCGTGAAAG TATGAAGGCA 
    GAAATGGAGA TAAGCT

AT5G04400.1

Model type
Protein coding
Short Description
NAC domain containing protein 77
Computational Description
NAC domain containing protein 77 (NAC077); FUNCTIONS IN: DNA binding; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot, flower, leaf; EXPRESSED DURING: petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 52 (TAIR:AT3G10490.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G04410.1

Model type
Protein coding
Short Description
NAC domain containing protein 2
Curator Summary
NAC family member, functions as a transcriptional activator, regulates flavonoid biosynthesis under high light.
Computational Description
NAC domain containing protein 2 (NAC2); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 53 (TAIR:AT3G10500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR