1. Home
  2. Mutant Lines
  3. 15-3145-1

15-3145-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15765109 [Map]; Strand: w
      • AT4G32680.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (5UTR)
      • AT4G32690.1 - [+] show detail - hemoglobin 3
        Distance: -293; Region: promoter
    Flanking Genome Sequence: 15-3145-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCACC CCAGCTTANT CCTTTNTAAA CGCGGATTNT 
    AAATCACTTA TTTCTTCAAA CGCAAATCGT CGTCACTAAA GAGTTTGTCG 
    CAGTTTAGAA TAATGGGCTT CTTAACGGGC CAATTCAAGT GTGCCCAATT 
    ACTTCAAAAT CCTAAATTGA TTGGATAGGA CCAAAAGTCA AAGAGAATCA 
    TCAAGACAAG TGTCTTTAGT TTTGGTCACG GCATATGCCA AAAAGGCCCA 
    ACTAGTGTAA TAGAAAAAAG AGAGCGTTGC CTCCACGCGA CCACGACCAG 
    AGCCCCCACC ATTCCTTTTT AAAATTCAAT TCAATCACCC ACAGTTTCTT 
    CATCACTGCG AGAGAGACGA AAACCAGAGA GAGAGAGAGA GAGAGGGAGA 
    TGCANTCGCT GCAAGATANG GCATCGGTGT TAAGCGGCGT CNATCANGCT 
    GNGGCGTTCG CCATCGACGA GTCCAATCTG TTNGACAAGC T

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15765101 [Map]; Strand: w
      • AT4G32680.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (5UTR)
      • AT4G32690.1 - [+] show detail - hemoglobin 3
        Distance: -301; Region: promoter
    Flanking Genome Sequence: 15-3145-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
    ACCCCGTCGA GAATTGGTTT CCTCTTTTCC TCGCTCCGAA GACAAGAAAT 
    ATTCCGGTGA GGCAATGGCG TCGAACAGCA GAGAAGCCAG GAGGCGGAAG 
    ATCCTAGATA GAGGATCTGA TCGTTTAGCC TTTATCACTG GTCAGATCAA 
    CGGCGTTCCT TCTCCACCTC CTTCCGATTC TACTTCTTCC CTTTCCCAGT 
    CTGACCTTCA AACTGACCAA TCCTTACCGG ATACGATTCC CCCTCGCGAT 
    CAGATTCTTA AAGCTCAAGA AATCGGTACT CTTTCGCTCT CTCTTTCTCT 
    AGGGAATATT GTCATCCTTG GATTGTTTGT GTGTGTAAGA ATTTGAGCGA 
    CACAATCGAA TTTTACTTAC TCTATTGGGT GAAAGGATAA TCAAATTGGC 
    TTCTTTGATC AGATTTTATG TGTGTTTGGC TCGTTTCAGA GTGGAATT

AT4G32680.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52343.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G32690.1

Model type
Protein coding
Short Description
hemoglobin 3
Curator Summary
Encodes a hemoglobin (Hb) with a central domain similar to the 'truncated Hbs of bacteria, protozoa and fungi. The 3D structure of these types of Hbs is a 2-on-2 arrangement of alpha-helices as opposed to the 3-on-3 arrangement of the standard globin fold. This type of Hb is not found in animals or yeast.
Computational Description
hemoglobin 3 (GLB3); CONTAINS InterPro DOMAIN/s: Globin, truncated bacterial-like (InterPro:IPR001486), Globin-like (InterPro:IPR009050), Globin (InterPro:IPR012292); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR