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15-3154-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 25675347 [Map]; Strand: w
      • AT1G68460.1 - [+] show detail - isopentenyltransferase 1
        Distance: -5165; Region: intergenic
      • AT1G68470.1 - [+] show detail - Exostosin family protein
        Distance: 1048; Region: intergenic
    Flanking Genome Sequence: 15-3154-1 - 5-prime edge 
    ATCCACATGC TGTCATGCTC TGCATCTCCC ACACGCTTGT CCCTAAACAA 
    ACCGTATTGA GTCCCAAACA ATAAGTACAT GACCGTAGTT TTTAATTCAT 
    AATTTTTCTA TATCCTCAGT TTTTTCTTTC ACACATTCAG CTTCAGGAGA 
    CATATTCCGG AGTATAATGT AAACAAAGTC TTTAAAAAAA AAAANAAGCT 
    ACCANCCNGG GCCGTNAACC ACCCGNGCCC TANAGNNANN NAACCACCCG 
    NGCCCTATA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 25675231 [Map]; Strand: w
      • AT1G68460.1 - [+] show detail - isopentenyltransferase 1
        Distance: -5049; Region: intergenic
      • AT1G68470.1 - [+] show detail - Exostosin family protein
        Distance: 1164; Region: intergenic
    Flanking Genome Sequence: 15-3154-1 - 3-prime edge 
    ATGTGGATGC TCAAATTGCA GAGACGATTA AAACTAATTA TATATACACA 
    TTGTGTTAAA ATAAATTATA ATTTCACTAT TTGATAGACA TCATCATAAT 
    GTTGTGTTTC CCTTGTAAAC ATTTGAAGAA CTCGATTTGT TTATTGTATT 
    TATAACATTT TTTGTTTTTG TCTTATCTTT TAATTACGTC ATGACTAGGT 
    ACCTAAACCT CGTTCTTAGC TTTAAGCT

AT1G68460.1

Model type
Protein coding
Short Description
isopentenyltransferase 1
Curator Summary
Encodes a putative adenylate isopentenyltransferase. It catalyzes the formation of isopentenyladenosine 5'-monophosphate (iPMP) from AMP and dimethylallylpyrophosphate (DMAPP), but it has a lower Km for ADP and likely works using ADP or ATP in plants. It is involved in cytokinin biosynthesis.
Computational Description
isopentenyltransferase 1 (IPT1); FUNCTIONS IN: AMP dimethylallyltransferase activity, ATP/ADP dimethylallyltransferase activity; INVOLVED IN: cytokinin biosynthetic process, secondary growth; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: ATP/ADP isopentenyltransferases (TAIR:AT3G19160.1); Has 7944 Blast hits to 7761 proteins in 2606 species: Archae - 0; Bacteria - 5388; Metazoa - 167; Fungi - 152; Plants - 293; Viruses - 0; Other Eukaryotes - 1944 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G68470.1

Model type
Protein coding
Short Description
Exostosin family protein
Computational Description
Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 782 Blast hits to 782 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 758; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
Link
InterPro Scan - TAIR