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15-3249-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 472615 [Map]; Strand: c
      • AT4G01090.1 - [+] show detail - Protein of unknown function (DUF3133)
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 15-3249-1 - 5-prime edge 
    CNTGAAAAAC TAACAAAATC GGTTATACAG ATAACGGTCG GTACGGGATT 
    TTCCCATCCT ACTTTCATGN CTGNGACCTG CCTCCGTATA GCCCGGTTTC 
    GTCTCACCAT CGTGGCNGAG AAACTCGCTA CACAGTACAG TGATATGCCT 
    CCCTATAGCC CGGTTTCGTC TCACCATCGT GGCGAGAAAC TCACTACACC 
    GTATAGTCCA CNGTGTTAAT AACGGTTCGA GTTTTCCTTC TTCGATGGGC 
    TCTCCAGGTC CTCGAGGTGG TTACACAAGG TGGCCGAGTG AACATGATTC 
    TGAAATGGGT GGTGCTTTTG CTCGTGGGTA TGTTAAGAAA GTTGTATCGG 
    ATACTGATGC TAGACGTTGT CATCCTCTTG CTGGTGGNGC TCCTTTTATA 
    GCTTGTCATA GTTGCTTTGA GCTGCTTTAC TTGCCTAAGA AGAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 504966 [Map]; Strand: c
      • AT4G01190.1 - [+] show detail - phosphatidylinositol phosphate kinase 10
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 15-3249-1 - 3-prime edge 
    ATAAGAACAT AAAACAAAAG AATGAAGAAT GTTGGTAAGG ATTTTTTACT 
    TGGAGGTGCG AAGCTACCGT AAACCGGGTT CAATCCATCA AGTGAACCTG 
    TTAAGAGTGA TTTATTATTA TGATCAGAAA AGTTCAAAGT CGATATGCAA 
    ATAGTTGCAC TCCTAAGAAG AGAGAAGAAA CATTACCTTG ACATGAGCCT 
    TTAGATTGTA AACCAACCAA TAAGCTATAA TCCATTATAC CTTCTTCTTC 
    CAAAAGCTCG CAATCTAGCT TTGTTTGCCT GTAATGACAT GACCCCTTTT 
    GTGTTTAATA AATTGTTGAG TAACTAGAAT CAAGATGGTA GAAAGAAAGA 
    GGGGTGGGGG TGGGATAGTA CTTGATGATG CGTTGTCTCG CCAAAGGATC 
    AACGTAGAAA CAGAAATCGA AATCGATGTC CTTCAAAACA GTGGTGTTTC 
    TCACTTCAAT TTTCTTGTTA GATCGACCTT TCGGAGAACC TTTAAGATCA 
    TAGAGCTTGT TCACAAAGAT CGTTGAATGT AGCATGTTTG ACATCACAGC 
    AAAATATGTC TGTTTCCAAG AAAAAAAGTA ACTAATTAGT GGCTGATCAA 
    ACTCTAATAA TGGAGTGGTA TATATATATA ATCCTTGTCA CCTTAACACC 
    TCCAAGAGGC TTCACAGAAT GAGCNCCAAA AATCCTTGTG AATAGGGGAT 
    GATCTGGGAT AATTAATATG TCTGNA

AT4G01090.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF3133)
Computational Description
Protein of unknown function (DUF3133); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3133 (InterPro:IPR021480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3133) (TAIR:AT1G01440.1); Has 1545 Blast hits to 1451 proteins in 231 species: Archae - 0; Bacteria - 62; Metazoa - 476; Fungi - 316; Plants - 452; Viruses - 2; Other Eukaryotes - 237 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G01190.1

Model type
Protein coding
Short Description
phosphatidylinositol phosphate kinase 10
Curator Summary
Type I phosphatidylinositol-4-phosphate 5-kinase, subfamily A. Preferentially phosphorylates PtdIns4P. Expressed in flowers and inflorescence stems.
Computational Description
phosphatidylinositol phosphate kinase 10 (PIPK10); FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity; INVOLVED IN: phosphatidylinositol metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol-4-phosphate 5-kinase, core (TAIR:AT1G01460.1); Has 1758 Blast hits to 1594 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 277; Plants - 390; Viruses - 0; Other Eukaryotes - 352 (source: NCBI BLink).
Link
InterPro Scan - TAIR