1. Home
  2. Mutant Lines
  3. 15-3263-1

15-3263-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28587809 [Map]; Strand: c
      • AT1G76180.2 - [+] show detail - Dehydrin family protein
        Distance: 0; Region: exon1 (5UTR)
      • AT1G76180.1 - [+] show detail - Dehydrin family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 15-3263-1 - 5-prime edge
    CGNTAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCT TGGACCCCTC CCGAGNCCTC AACACTATAT
    AACACACGTT TCTTCTCTAA TCTCCATCAC CTCTTATTTT CATCTGCTTT
    TGAATTTCAA ACCTTCACAT AAAAAAAATA CTTTTGAATC CGTGTTTCAT
    TCATCGAATC TTTTTCCGAT AACTATGGCT GAGGAAATCA AGAATGTTCC
    TGAACAGGAG GTGCCAAAGG TAGCAACAGA GGAATCATCG GCAGAGGTTA
    CAGATCGTGG ATTGTTCGAT TTCTTGGGAA AGAAGAAAGA CGAAACAAAA
    CCAGAGGAGA CTCCGATCGC TTCAAAGTTT GAGCAGAAGG NTCATATTTC
    ANAGCCGGAG CCNGAGGTGG AACNCNAAAG TCTTCTTGAA AAGNTACCAN
    NNCAGGGCCG CGNCCACCCC NGGCCCCCTN GNGNGNGTTT TATGGGATGT
    NGCTTNNCNT CGCCCCCCGN GGGGTNTNNG GGGGGGGGGG GGNTNNNTTG
    ANNNNNCCCN CCCCCCCANG GCGCCGCGCG TANTNNTNNA NCNGGNCNNC
    GCNCNCTNNN CNNNNNNANN NNNNCNNNGN NNCCCCCNNC NNGNNGNNNN
    GTNNANGGNN CGNTNCGNNG AGCNCGNGGN NNTGNNANNC CANANTGTNA
    NGTNNNNNGN NCNCGCNCGN NNTTGACGNA TNGCGGCNGC NCGNNCNANA
    GNNGGCGNGG NGGCCANNNT NNNCCATNGN NATCNNGNCN NCTNGNANCG
    TCCNGNCGAN NCANNANCNA NG
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28587817 [Map]; Strand: c
      • AT1G76180.2 - [+] show detail - Dehydrin family protein
        Distance: 0; Region: exon1 (5UTR)
      • AT1G76180.1 - [+] show detail - Dehydrin family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 15-3263-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    ACCGCGGATT TCACGCTCTT TGTACACTTT TTTTTTGCAA TTTAAAAACA
    TATATCTAAT TATATGAAAT TACAAAATGA CCCGCTTTTT ATGGCATCTT
    CTCCTTCGTC CCCACGTTAA TTATCATTTT TCTGTTAATT ANATAAAGTT
    ATATTGGATT AANAANAATT

AT1G76180.1

Model type
Protein coding
Short Description
Dehydrin family protein
Curator Summary
Encodes a dehydrin protein whose expression is induced early on in response to dehydration stress. This gene's expression to cold occurs in two waves, with early induction occurring within 1 h and secondary induction occurring 5 h after the beginning of cold stress. Expression is also induced in response to ABA but not in response to 2,4-D, BA, and GA3. ERD14 protein is capable of binding Ca2+, especially when the protein is phosphorylated.
Computational Description
EARLY RESPONSE TO DEHYDRATION 14 (ERD14); FUNCTIONS IN: calcium ion binding; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrin (InterPro:IPR000167); BEST Arabidopsis thaliana protein match is: Dehydrin family protein (TAIR:AT1G20450.2); Has 4819 Blast hits to 3364 proteins in 392 species: Archae - 4; Bacteria - 256; Metazoa - 1221; Fungi - 272; Plants - 1466; Viruses - 16; Other Eukaryotes - 1584 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G76180.2

Model type
Protein coding
Short Description
Dehydrin family protein
Curator Summary
Encodes a dehydrin protein whose expression is induced early on in response to dehydration stress. This gene's expression to cold occurs in two waves, with early induction occurring within 1 h and secondary induction occurring 5 h after the beginning of cold stress. Expression is also induced in response to ABA but not in response to 2,4-D, BA, and GA3. ERD14 protein is capable of binding Ca2+, especially when the protein is phosphorylated.
Computational Description
EARLY RESPONSE TO DEHYDRATION 14 (ERD14); CONTAINS InterPro DOMAIN/s: Dehydrin (InterPro:IPR000167); BEST Arabidopsis thaliana protein match is: Dehydrin family protein (TAIR:AT1G20450.2).
Link
InterPro Scan - TAIR