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15-3356-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 95649 [Map]; Strand: c
      • AT4G00230.1 - [+] show detail - xylem serine peptidase 1
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 15-3356-1 - 5-prime edge 
    CTTACAGAGA AGGATTTGCC GTTGCCGAGA TCTATCTTGC TCTTGAAAGT 
    CCGATCGATT CCGCTTGCAG CAACCGTCAA TATCCACGGC TCGTGGTTCG 
    TTACAGTCCC TGAGCTCGGC CCGTCGTTAC CGGCGGACGC CACCGTGAGG 
    ATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 95758 [Map]; Strand: c
      • AT4G00230.1 - [+] show detail - xylem serine peptidase 1
        Distance: 0; Region: intron6 (CDS)
    Flanking Genome Sequence: 15-3356-1 - 3-prime edge 
    GCGTGACCCG NCCGTNCGGG GGATCNTACC CAGCTNGAAC TAATNTNATG 
    TGAAGANAAT CACAAANCCG GGCNANTCGA CCNGGCATGN NAATNTAGCA 
    TGTTTAGTCC AAAAGCAAAA TCGTATCCGC TTGTAAGTGG TGTTGATGCN 
    TGCTAAGAAC ACAGACGATA AGTACTTGGC TAGGTAACAT CATTATCACC 
    ATCAACTTCA TTTGAATATG TTAAGAGAAA CTAAGACATT GTTTGTTTGA 
    TGATGTTTAA GGTATTGTTT CTCTGATTCT TTGGATCGAA AGAAGGTGAA 
    GGGAAAGGTA ATGG

AT4G00230.1

Model type
Protein coding
Short Description
xylem serine peptidase 1
Computational Description
xylem serine peptidase 1 (XSP1); FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilisin-like serine endopeptidase family protein (TAIR:AT5G03620.1); Has 8915 Blast hits to 7721 proteins in 1255 species: Archae - 263; Bacteria - 5173; Metazoa - 170; Fungi - 606; Plants - 1952; Viruses - 0; Other Eukaryotes - 751 (source: NCBI BLink).
Link
InterPro Scan - TAIR