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15-3368-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 288647 [Map]; Strand: c
      • AT3G01810.3 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: 0; Region: exon1 (5UTR)
      • AT3G01810.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: 0; Region: exon1 (5UTR)
      • AT3G01810.2 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 15-3368-1 - 3-prime edge 
    TTAACCAAAA CGCACACAAA CAAAGAAGAA AAAAAGCTAT GAAAACAGGA 
    AAAAAAATCG GAAATATCAG TCTTGTCTAA AACGACGAAG AAGAAGAGGA 
    AGAATCGAGA CAAACATTTC ACATTCCCAG AGATTGTGCN TGTTGTTGGG 
    TATTCATTCT CTCTCTCTCT CACATTACTT TGACGAGTTC TTAGTGTGTT 
    GGTTCTCCAA ATGCTGTGCT GCATATTACA TTAAAATCTC TCACTGCTTT 
    TTCTTTGGGC TATAATATAT GTNGGGTTTT CTTCAACTTG CTTGGATCTG 
    TTGTAATAAG CGAGTTAGCT CAAAATCTCT TTCTTAATGA ATGAGCTTTC 
    AAAGTTAGCT GTTTTTTCCT CTTCTTCTTC TTTATCTTGG ATCTTGATCT 
    ATCGAATCAG TAATGTGTTT GGAATACCAA ATTAGGAGAA TTTTTCACAT 
    ACATTTAGCT TTCTGGTTCA TGCATTGTCT TAGCATTTGA CGGTTTCGCT 
    GTTTCAGATT AAATGTTTAA TTCTTAGGGT TTAGACAAAG CT

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 288564 [Map]; Strand: c
      • AT3G01810.3 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: 0; Region: exon1 (5UTR)
      • AT3G01810.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: -5; Region: promoter
      • AT3G01810.2 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: -9; Region: promoter
    Flanking Genome Sequence: 15-3368-1 - 5-prime edge 
    NTGGTTAATC AGAGGATGTG AGCCACTGAC ACAGAATGAA NAATCTTTAG 
    TCTCCTCTAN ATTACGACTT AAAAAAAATT TATGATGCCA TAAAGAAAAG 
    AAAGCAAAAA AAAGAGAGAA GAATTTCAAT TTGGAAAAAT CTGAAAATGA 
    CCAAAAAAGA ATAAAAAAAG GAGTTTGATC GTGCAAATAT CGAAACGGCG 
    ACATTACGGN GATCTCCTGG TCCCTGACTA AAAAAGTGAA CACCGACGGG 
    CTTTAATGGT CACAAATTTC GATAGATTTT GCCTTAGTCT CCGTCACCAA 
    TGCGAGNGGG CAAAGATTAA ATGATATCGT TATTACGTCT TTAATATTGT 
    TATNGCTCAA CATTTANATA TATCATATAT GTACATGTAC ATGTACATGC 
    TTTTTTTTTN GTTNTNTTTT TTNNCCNNCA AATNNNNCAG CTGGTTNTNT 
    NCTNANNTAA CCTNCATTTN TTTNTTAGGG ANCAATTTTA AATNTTAAAG 
    GCNTTCAATT TTAAAATNTA AAATTNGGGG TNGGGGAGGA CGGGTTTTTT 
    TTTATTTTTN TTGCAAAANG GGNCCGNTTT TAAAGTAAAC TTTGNNNGAA 
    ANCTTTNNAA TTTGTGGNAA NGGCCCCTNN NTTTGGGANG CNGNAAAAAG 
    TTNAANCCGG GGCNGNGNAN ANNCNGGCCC TAAANNNANA NNNNNNNNNG 
    NGNGNGN

AT3G01810.1

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 1327 Blast hits to 470 proteins in 132 species: Archae - 2; Bacteria - 131; Metazoa - 139; Fungi - 114; Plants - 114; Viruses - 0; Other Eukaryotes - 827 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G01810.2

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 1232 Blast hits to 443 proteins in 120 species: Archae - 2; Bacteria - 119; Metazoa - 136; Fungi - 117; Plants - 114; Viruses - 0; Other Eukaryotes - 744 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G01810.3

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2).
Link
InterPro Scan - TAIR