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Mutant Lines
15-3393-1

15-3393-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 7652310 [Map]; Strand: w
  - AT1G21770.1 - [+] show detail - Acyl-CoA N-acyltransferases (NAT) superfamily protein
    Distance: -22; Region: promoter
  - AT1G21780.2 - [+] show detail - BTB/POZ domain-containing protein
    Distance: 0; Region: exon1 (5UTR)
  - AT1G21780.1 - [+] show detail - BTB/POZ domain-containing protein
    Distance: 0; Region: intron1 (5UTR)
Flanking Genome Sequence: 15-3393-1 - 5-prime edge
```
CCCGTCGCCA TTTTATCTGT TATCTCTCTA AGTCTAAGTC CACTCTCTTT 
CATTTCAAAC CGAGAATTGA TTTTAATATA TCAGTTAGTA AACCGGTTTA 
ATGGATAAAA ACGTATAATC GTCGTACACN GTGGCAGGCG ATGGAGGCGG 
CAGAGTGTTT TGCTTGCTTC GTCGTGTTAT TTGGCGTGAA GTAAAGAGTT 
CAGAGAGAAA AGGAAGTCAA AACTTCAGAG AGAAAGTGGA TGGGGGACAC 
GAAGGTAGAG ACAATCTCGA GGTTAGCTCA ATGGAGAATT GAAAATTTTG 
GTCCTTGTTC TTTCAAAAAG TCCGATCCTT TCAAAGTCGG AATTTGGAAT 
TGGTAAGCT
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 7652194 [Map]; Strand: w
- AT1G21770.1 - [+] show detail - Acyl-CoA N-acyltransferases (NAT) superfamily protein
  Distance: 0; Region: exon1 (CDS)
- AT1G21780.2 - [+] show detail - BTB/POZ domain-containing protein
  Distance: 0; Region: exon1 (5UTR)
- AT1G21780.1 - [+] show detail - BTB/POZ domain-containing protein
  Distance: 0; Region: exon1 (5UTR)

GCGACGGGGA CGGCGACGGA GAAACCGAAG ATCGTGTGGA ACGAAGGAAG 
ACATAGATTC GAGACTGATG ATCACGAAGC CTTCATAGAG TACAAGATGA 
AGAATGACGG TAAAGTCATG GATCTGGTTC GAACCTTCGT ACCGCCGTCA 
AAAGCAGGAC TTGGTTTAGC TTCGCATCTA TGCGTCGCCG CTTTCGAACA 
CGCCTCTGAA CACTCTTTCT CCATCATCCC CACTTGCTCC TACGTTTCCG 
TATACATCTC TTCTTTCCTC AAAAAATTGA GATGAATCAG ATTCTTATGA 
AAATATGTCG TGTTTTGCAG GAAACGTTTC TTCATCGAAA CCCAACGTGG 
CAGCGTCTGG TTCACTCAGA GGATGATTCC AAGAACCTCA AGTCTAGCAT 
CTGATCAAGT CCTGCTTTAA AGCCTTTTGG TGTATAATAA AAACTTGAAA 
ACATTATCTT ACAATAGTAA AGCT

AT1G21770.1

Model type: Protein coding
Short Description: Acyl-CoA N-acyltransferases (NAT) superfamily protein
Computational Description: Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT1G77540.1); Has 425 Blast hits to 425 proteins in 193 species: Archae - 10; Bacteria - 360; Metazoa - 6; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G21780.1

Model type: Protein coding
Short Description: BTB/POZ domain-containing protein
Curator Summary: BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B.
Computational Description: BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G55760.1); Has 5195 Blast hits to 5164 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 3886; Fungi - 25; Plants - 983; Viruses - 68; Other Eukaryotes - 233 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G21780.2

Model type: Protein coding
Short Description: BTB/POZ domain-containing protein
Curator Summary: BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B.
Computational Description: BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G55760.1); Has 5195 Blast hits to 5164 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 3886; Fungi - 25; Plants - 983; Viruses - 68; Other Eukaryotes - 233 (source: NCBI BLink).
Link: InterPro Scan - TAIR