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15-3478-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 9105703 [Map]; Strand: c
      • AT2G21250.2 - [+] show detail - NAD(P)-linked oxidoreductase superfamily protein
        Distance: -516; Region: promoter
      • AT2G21250.1 - [+] show detail - NAD(P)-linked oxidoreductase superfamily protein
        Distance: -516; Region: promoter
      • AT2G21260.1 - [+] show detail - NAD(P)-linked oxidoreductase superfamily protein
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 15-3478-1 - 5-prime edge 
    CATGGAAGTG ATCAAAAGCA TGGAGAGGAA TTACCGCACG CACCAAACAG 
    CCAAGTTTTG GGGCATTGAG CTCTACGCTT GATCACACAC ACACTCTCTC 
    TCTCTATCTA TCTATATGAA TAAATGAAGC T

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 9105819 [Map]; Strand: c
      • AT2G21250.2 - [+] show detail - NAD(P)-linked oxidoreductase superfamily protein
        Distance: -632; Region: promoter
      • AT2G21250.1 - [+] show detail - NAD(P)-linked oxidoreductase superfamily protein
        Distance: -632; Region: promoter
      • AT2G21260.1 - [+] show detail - NAD(P)-linked oxidoreductase superfamily protein
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 15-3478-1 - 3-prime edge 
    CTTCCATGTC CTCTTTCGAT AGTTGGAAGT CGAAAACCTG AAAATTCTCT 
    TCCAATCTTT CAGGCTTCGA TGTCTTTGGT ATCACCACCG TGTTCCTCTG 
    AATT

AT2G21250.1

Model type
Protein coding
Short Description
NAD(P)-linked oxidoreductase superfamily protein
Computational Description
NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G21260.1); Has 23237 Blast hits to 23200 proteins in 2399 species: Archae - 409; Bacteria - 15760; Metazoa - 2015; Fungi - 1895; Plants - 1372; Viruses - 0; Other Eukaryotes - 1786 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G21250.2

Model type
Protein coding
Short Description
NAD(P)-linked oxidoreductase superfamily protein
Computational Description
NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G21260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G21260.1

Model type
Protein coding
Short Description
NAD(P)-linked oxidoreductase superfamily protein
Computational Description
NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G21250.1); Has 23588 Blast hits to 23552 proteins in 2429 species: Archae - 415; Bacteria - 16046; Metazoa - 2035; Fungi - 1934; Plants - 1382; Viruses - 0; Other Eukaryotes - 1776 (source: NCBI BLink).
Link
InterPro Scan - TAIR