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Mutant Lines
15-3481-1

15-3481-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 2; Position: 7622205 [Map]; Strand: w
- AT2G17520.1 - [+] show detail - Endoribonuclease/protein kinase IRE1-like
  Distance: 1096; Region: intergenic
- AT2G17525.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
  Distance: -1621; Region: intergenic

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
AAACATCAAC ACATAAATTT AATGTTAGTT TGGTTGAATG TATGTGATGT 
TCTAAATTTG ACATGACTCG AAGTAAAAAA TTTGTTGTAT AAACTGCATA 
TTGAGTTACA TTTACAACAA CAGTTTTTTT TGGAGGAGTA TCNGTGAATA 
AGAGTTCAAG TCCACTCGAT CCTCACTTTA GAAGAAATTC TAAAATTCTT 
ATATTTGCTA TTATTACTCT TCCTAGAAAA CACTAAACAA TATTTAAAAA 
TTTAGATGCA GCCATAATTT CCGCGATCAA CTTTGGCATC GTTGTAATAT 
GAGAAACACA AATGTTGAGG GGGTTAATCG TTTGGTTCCC ATCATGACGC 
CACTATAAGG GGGTAATTGA GGCGTCATAA TTTTGTCAAA TAAGATATCC 
ATTATGCCCT CTCAGTTAGT TGGTTAAGTT TTAACGTTGG TCAGTCGATT 
AATAATCCAA TTTANACAGT TTTTTATTTA TAGTTATAAA TTATAGAGGT 
CGGAAAAGAA ATTTTTAAAA TCAAGATAAA AAAGGTTATA CAAAAATGGA 
TGCGAGTCTA TAGCATATAC GANAAATGTT AGATATGAAG CAACCAAAGT 
GATAAGCT

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 1434389 [Map]; Strand: w
  - AT1G05010.1 - [+] show detail - ethylene-forming enzyme
    Distance: -1531; Region: intergenic
  - AT1G05020.1 - [+] show detail - ENTH/ANTH/VHS superfamily protein
    Distance: 865; Region: intergenic
Flanking Genome Sequence: 15-3481-1 - 5-prime edge
```
TATAAACTAA CAAAATCGGT TATACGATAA CGGTCGGTAC GGGATTTTTC 
CATCCTACTT GAGAAGTCAA GAAGTTAAAT CAACTTGTAA TGAGAAACCT 
AAGAAAGGTG GAATCCTAAA TTCACATATA CAGAAGCT
```

AT1G05010.1

Model type: Protein coding
Short Description: ethylene-forming enzyme
Curator Summary: Encodes 1-aminocyclopropane-1-carboxylate oxidase
Computational Description: ethylene-forming enzyme (EFE); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate oxidase activity; INVOLVED IN: response to fungus, ethylene biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G12010.1); Has 8587 Blast hits to 8552 proteins in 1009 species: Archae - 0; Bacteria - 1142; Metazoa - 103; Fungi - 1035; Plants - 4924; Viruses - 0; Other Eukaryotes - 1383 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G05020.1

Model type: Protein coding
Short Description: ENTH/ANTH/VHS superfamily protein
Computational Description: ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: clathrin coat assembly; LOCATED IN: clathrin coat; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT4G32285.2); Has 663 Blast hits to 661 proteins in 84 species: Archae - 0; Bacteria - 2; Metazoa - 204; Fungi - 47; Plants - 394; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G17520.1

Model type: Protein coding
Short Description: Endoribonuclease/protein kinase IRE1-like
Curator Summary: Encodes a endoribonuclease/protein kinase IRE1-like protein that is predicted to form a type I transmembrane protein structure and contain kinase/endoribonuclease domains at their C-terminal halves. The transcript levels for several ER-stress responsive genes, including six protein disulfide isomerases (PDIs), BiP2, and AtbZIP60 are not affected in ire1-2 null mutants.
Computational Description: IRE1A; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), KEN domain, ribonuclease activator (InterPro:IPR010513), PUG domain (InterPro:IPR006567), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: inositol requiring 1-1 (TAIR:AT5G24360.1); Has 104790 Blast hits to 103944 proteins in 4127 species: Archae - 110; Bacteria - 12550; Metazoa - 37627; Fungi - 10369; Plants - 27162; Viruses - 328; Other Eukaryotes - 16644 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G17525.1

Model type: Protein coding
Short Description: Pentatricopeptide repeat (PPR) superfamily protein
Computational Description: Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G74580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR