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15-3507-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 191233 [Map]; Strand: c
      • AT4G00430.2 - [+] show detail - plasma membrane intrinsic protein 1;4
        Distance: -3606; Region: intergenic
      • AT4G00440.1 - [+] show detail - Protein of unknown function (DUF3741)
        Distance: -2646; Region: intergenic
    Flanking Genome Sequence: 15-3507-1 - 3-prime edge 
    GAGAGCAGTA AGCAAGCAAG ACGAAATTTC AAGATGAAAA ATAAAGATGG 
    AGGCTTCTCA TGCTTGCTTG ATACCAAAGG TTACTACTTA TACATTTCAT 
    ACTCTCTCCA ACAACAAGGC TTTTTGTTCA ATTGTTTTAA ACAGGTAAAG 
    GCTAAATCCC ATCAACAGGG ATTTGAGGCC CATTGTCGGA GAGAGTTTAG 
    GCTTGGGACC AATTTGTTAC TATGCATATG GGATTTTGTT AAAGCATTGA 
    TATCAAGAAT AAATTAGGGT ACTAAAAACT TAGTAACTAA AGTGAAGTGA 
    CTGGTTTAGA AAATTCTTAA CCCACATATA TATTTAATTA CGTCCAACAT 
    TATGATTAAG GCTACTATAA TGTTGCTTAT CCGTCAGGTA AAACAACTCA 
    TCCATTGCCC TTTTTCAGCA ATTAAACAAA TTTTAATATT GGTTAGATTT 
    GCTTTTGGCC TAAACCTTAT TTTAAGAATA TAAACAATTA CAGTGAAAGA 
    AGAAAATTCA TGTGTTATCG TCTTTGAGAT TTGTAAAGCA ATCACCAAGA 
    TTGTCCTATC AAGTTGCTTA ATGATGTATT TTAACCTTTT AAAAGATTAA 
    AGCT

AT4G00430.2

Model type
Protein coding
Short Description
plasma membrane intrinsic protein 1;4
Curator Summary
a member of the plasma membrane intrinsic protein subfamily PIP1.
Computational Description
TRANSMEMBRANE PROTEIN C (TMP-C); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B (TAIR:AT2G45960.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00440.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF3741)
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT2G45900.1); Has 1239 Blast hits to 1045 proteins in 162 species: Archae - 0; Bacteria - 74; Metazoa - 262; Fungi - 79; Plants - 239; Viruses - 0; Other Eukaryotes - 585 (source: NCBI BLink).
Link
InterPro Scan - TAIR