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15-3580-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage
Phenotype
flower (PO:0009046)
  • abnormal (PATO:0000460)
    (Flowers::others)

fruit (PO:0009001)
  • decreased length (PATO:0000574)
    (Fruits (Siliques)::short)

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1643809 [Map]; Strand: c
      • AT1G05550.3 - [+] show detail - Protein of unknown function (DUF295)
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 15-3580-1 - 3-prime edge
    CTTTAAACGG TACCAGGTAT TTTACCTNAC CGTTACCGAC CGTTTTCATC 
    CCGAGTCCTC ACGATGATAT ACTCCAAGAG AGCACTCTTC TTCACGATGA
    CTATGTATGT TGTTTGTGTT TGAGTTTAGG TTTAGATTTT AGATATCTAG
    AAGAGGTTTT ATATAGGTAA TGAGACGAGA AAGAGGAAGA TGTATAATAA
    ATTTTCATGG GAGAAAGAGG ATGATAATTC ATTTTCAGTT TCCTCTATTG
    TTCACTGAAA TGCAAAACAA GCAGAGAGGG CACAGATTCT ATAAGGGTTG
    AGTAATGGAA TCTTGGGTTA AAAGCCGAGA AAGAGATGTC TCTGCATGAA
    GAAGAAGATG GTGTCGATGG GGAGATAGAG AAAGATATGA ACTGTAATGC
    ACTATGACTA TAACATTGGA GATTGTGACC CCACATCACA TGTGCTATCA
    TAAATTAACT GAGTAATACA CTAATATGTG TTAGCCTGTT AGGTATATAA
    TAGTAAAATC CTCAAGTCAT TATATGAGAA CCACGTTATC AAAACCGTAA
    ATGTAAACTA AGGAATATGA TCAAAACAAA CTTTAAGAAA AAATAAAAAA
    AATTGGACTA TAATAACCGA GTACATTATG TGGACGCATT GATAGAAGAA
    AGAGGAAGAT GTCTAATAGT AATAACTATA AGGTTGAGTT AAGTTATTAC
    TTTTTTGGTT AAAACTTAAA AGCCAAGAAG AGATGTCTGC CTCTGGCTCT
    GGCATAGTGC ATAATGGTTG GTGTTGATGG GGAGAAAGAN AANAAGTGAC
    CTTGTAATGT

AT1G05550.3

Model type
Protein coding
Short Description
Protein of unknown function (DUF295)
Computational Description
Protein of unknown function (DUF295); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT1G05540.1).
Link
InterPro Scan - TAIR