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15-3636-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 15383841 [Map]; Strand: c
      • AT5G38420.1 - [+] show detail - Ribulose bisphosphate carboxylase (small chain) family protein
        Distance: -1806; Region: intergenic
      • AT5G38430.1 - [+] show detail - Ribulose bisphosphate carboxylase (small chain) family protein
        Distance: 276; Region: intergenic
    Flanking Genome Sequence: 15-3636-1 - 5-prime edge 
    GAGAAGATGA AAGTTACATA GCCCTTTGGA AAGGAAAAAA TGATCACTAC 
    CGTCAAAAGT TTGTCACAAG AGATACATGC TCAAAAATTC GCAACACTAA 
    GCCTACGATG GACNGGATAC AAAGGGATCT GTTCCTTTCT CAGTTGGCTA 
    GCTTCAAAAA CCAGAGTTGC CACGGGAGAC AGAATGTTTA AATGGAATCA 
    ACAAGTGAAC ACAAACTGCA TGTTATGTCA CGAACCTATG GAAACAAGAC 
    ACCATCTTTT TTTTGGGTGC TCTTACTCGC ANAAGGTATG GGAGAAGCTG 
    ATAAGGGGAA TACTACTTGA TAAGTACTCG ACATATTGGA GGGAAGTCTT 
    TAAAACCATT TGTGACAAAA ACTATGACAA AACAAAAATC TTCATTCTAC 
    GGTATGTCTT CCAAAACACG GTTCATTCGA TTTGGGGAGA AAGAAATGCT 
    TGAAAGCATG GTGAACAACC ATCACCANTG GAGAAACTTG TNAAGTTAAT 
    TGACAAAAAT GTTNGGAACC GNNCTGANCA CAATACTGAN TGGGGGGAGC 
    TNTGAAGTTT GANGGAGGNC TTCAAGTTTG GTTTGGNTCA ANGAAANGCT 
    AAAANCCCGG GCCGGGGACC ACCCTGCCCN TTNNAANNNN NNAG

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 15383979 [Map]; Strand: c
      • AT5G38420.1 - [+] show detail - Ribulose bisphosphate carboxylase (small chain) family protein
        Distance: -1944; Region: intergenic
      • AT5G38430.1 - [+] show detail - Ribulose bisphosphate carboxylase (small chain) family protein
        Distance: 138; Region: intergenic
    Flanking Genome Sequence: 15-3636-1 - 3-prime edge 
    ATCTTCTCTA AGACGACATC TCTATTTTCT ACGTATTTTT ACTACCTTTA 
    CTGGCTGTTT TTCATCTTTA AATTAAAATG TTCTAAATCA ACCCTCAAAA 
    TTTGATTGAT GGACGCATCT TTGTTATGCT TTCAAGTGCG AAATGTACCT 
    AAAAAGGGTA CTCTTTCATT AGAGAACCAA AGGCAAGAAT TAGGAGAGAA 
    ATTTAAAGGA ACTAAAATGT TAGTTAAAAG AGATAAAACG AATAAAAAGA 
    GTTAAAAGTG ATAAGAGCAG AAATGAAGTG ATATGAATAG AGATTTTTAT 
    AGAGGAAACG ATAGAAAAAC AAACCTTCAG TTTTTTCACT TTGGCAAAAT 
    AATTACTTAA ATTTACATTG ACCATACAAA ATTGGGTTCC GGATAGTCAA 
    CATTGAATAT TCCAGAAAAG GATTTAAGCA TTAGTGAAGC T

AT5G38420.1

Model type
Protein coding
Short Description
Ribulose bisphosphate carboxylase (small chain) family protein
Computational Description
Ribulose bisphosphate carboxylase (small chain) family protein; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: carbon fixation, response to blue light, response to red light, response to far red light; LOCATED IN: in 8 components; EXPRESSED IN: 10 plant structures; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain (InterPro:IPR000894); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G38430.1

Model type
Protein coding
Short Description
Ribulose bisphosphate carboxylase (small chain) family protein
Computational Description
Ribulose bisphosphate carboxylase (small chain) family protein; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: carbon fixation, response to blue light, response to red light, response to far red light; LOCATED IN: in 7 components; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain (InterPro:IPR000894); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR