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Mutant Lines
15-3651-1

15-3651-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 8895590 [Map]; Strand: c
- AT5G25550.1 - [+] show detail - Leucine-rich repeat (LRR) family protein
  Distance: 110; Region: intergenic
- AT5G25560.1 - [+] show detail - CHY-type/CTCHY-type/RING-type Zinc finger protein
  Distance: -2281; Region: intergenic

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCTTG TAACCTCATT TGGTTCCCAC TACAAACACC 
GTAGATATAT CTCATCTGGC TTTTACTTTC AACATCTAAA CATGCGCTTT 
CTAGTTTTTC TACAAATGTC AAATAGATAG ATCAGTTCAT AGACGGCGCC 
AGTGACAATG GTGGTGGTGG AGGTGGTGAG TATACCGGCG GACATGGTCT 
AGCCGGAGGC GGTGTTGACA ATGGTGGTGA AGTAGGAGAT GGCGCCGGTG 
CCAATGGTTG CGAAGATGGT GATATTTGAC TCGGAGGAGG AGAAAAACAC 
GAAGAGCCAG GACTACACTT GAAAGAGTCA CAATCTACAG GTTTCGACAA 
AAACATCTTA CACTCCATCA TCGATCTTTG GTCCCTCACG TCCTTGAAGC 
AATTCATCGT ATAATTATAA TTCTCTAGAT AGCGACACGT GGCTGGTTCT 
CCGGTGAAAT AGTTAGACCC GTATCTAAAA TCTCTTAGCT TCTCAAGCGA 
ACATAGCTCA TCCGGTATTA AACCGGAGAG CATGTTACGT TCAACGTTCA 
ACACCTCAAG ATTCTCCATC TGACCCATCG ACTTANGTAA CTCTCCGACC 
AACCAGTTAT AACTAATGTC CAAAACCGTA AGCGTTTTGA AGTAATCCCA 
TGTCATTAGG TATACAAGAT TGTAACCGTT ATNCATAAAN AATGATCTCG 
TTTANAGTNT TACCCATTTT ACCGAAACTN GGGGGTATGC ATCC

3 prime edge [+] show sequence

Chromosome: 5; Position: 8895595 [Map]; Strand: c
- AT5G25550.1 - [+] show detail - Leucine-rich repeat (LRR) family protein
  Distance: 115; Region: intergenic
- AT5G25560.1 - [+] show detail - CHY-type/CTCHY-type/RING-type Zinc finger protein
  Distance: -2276; Region: intergenic

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTAC 
AAGTGGAGGA GACAACAAGC TGAAAATCTT TAGGACACCG AGTGTATAAG 
GACTTGTCTC TTTTTTATAG ATTGCATGCA TGTGCAGTGT GTTTAATTTT 
AACTTGATAT AATTTTTTGA GTCCATATTT CTTGTTGAGT GTTTTTCAGT 
TNCATTAATA AAANCCANCC CGGNCCGTCA ACCACCCNTG CCCCTANAAN 
ANANNNNNGN NNANNGNNNN NNANNNNNNT NANNNGNANC NANCCNGGNC 
NNNNNACCNC NCNNNCCCNN NA

AT5G25550.1

Model type: Protein coding
Short Description: Leucine-rich repeat (LRR) family protein
Computational Description: Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G24480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G25560.1

Model type: Protein coding
Short Description: CHY-type/CTCHY-type/RING-type Zinc finger protein
Computational Description: CHY-type/CTCHY-type/RING-type Zinc finger protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: CHY-type/CTCHY-type/RING-type Zinc finger protein (TAIR:AT5G22920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR