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15-3666-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7950167 [Map]; Strand: w
      • AT1G22500.1 - [+] show detail - RING/U-box superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-3666-1 - 3-prime edge 
    CGTCCAAGCC ACTGAGTCAA TCAACCGCTC GTCAGGTGAA GTTAAAACCC 
    TTTTCCGGTT ATCATCAATC GGCGTTCTGA GAGAGTTCTG ACCGGTTTCT 
    CTAGCTAAAC CGGGTATCTC CGAAGAAACA GACTCACCCG GTACAGGAAC 
    GAGATTGGCT CGGCAAAGAG GACATGTGGT CTGAGAACGG AGCCAGGCAT 
    CAATGCAACC AGGATGAAAC ACGTGACAAC ACTGAGGAAT CAAACGCAGC 
    GTTTCGTCGT CCTCGAACTC GTTGAGACAA ACGGGACACT CCAAAGCT

AT1G22500.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: stem, cotyledon, root, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G72200.1); Has 9627 Blast hits to 9604 proteins in 288 species: Archae - 0; Bacteria - 2; Metazoa - 2532; Fungi - 813; Plants - 4919; Viruses - 76; Other Eukaryotes - 1285 (source: NCBI BLink).
Link
InterPro Scan - TAIR