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15-3683-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7272959 [Map]; Strand: c
      • AT1G20900.1 - [+] show detail - Predicted AT-hook DNA-binding family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 15-3683-1 - 5-prime edge 
    NTTCNATCGC CGCCNCATNT ACTAATTCCC TATCCCACCA CTGGTTATTC 
    GCCAGCTNAA ATCAATTTCT CGATTCTTGA TCCTGCTCGT TCATATATTG 
    GTAGCTAGGT GAAGAAGAGC GTAAAGAGAG AAAAAGAAAA CTCAGATCGA 
    GAAGTCAAAA CTCATGATTT TGAGGAAACA ATAGCTAAAG CATTAAGGTG 
    TGATCGGTTA CGCAAGCCGA CAAAATATAG AAACAGACCA AGAACAGAAC 
    TAAATTAAAG ACGAAGCAAA AGATATAAAA AAGGNGACTT ATGTTAAATG 
    ATCTCTCTCA TGAAAGGTAA GAGGAAACCC TANTTAGGTN GATTAATTAG 
    GGCAAGAGAA AGAAGTAGCT TCTTCTTTGC ATAGGAGNCN NATTTANCGA 
    TTCTGATGNG CTATGGGAAA AAAAAGGAGA NAGAAGCNTG TCAGCCCGGG 
    CNGGNAAANA AANANNNCCC CCCNNGGGGG GGNCAANTGN AAANGGGGCG 
    ACCGGGGGNG NNGCANNGCC NTGCNNGGNC GTGGGNNGTN NTGNNTTTAN 
    NCCGCGNGNT CCNTCNTCCN NNNTGTNTCC NANCNNNGNT CNNGCCNTGG 
    CGNNCGCCCN ANCNANCGAN GACNNGGNCN NCCGANNNNG AACNATACAN 
    NNGNNNCNAN TANGATNGCG TGNGANNCGG ANCCNNGNNN GNGNGNATCN 
    NNGNNAATTC CNANNGCGGN NNNNCNCCNN CCCANATCG

AT1G20900.1

Model type
Protein coding
Short Description
Predicted AT-hook DNA-binding family protein
Curator Summary
Encodes an AT hook domain containing protein that acts redundantly with SOB3 to modulate hypocotyl growth inhibition in response to light.
Computational Description
ESCAROLA (ESC); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT1G76500.1); Has 2335 Blast hits to 2120 proteins in 205 species: Archae - 0; Bacteria - 577; Metazoa - 531; Fungi - 95; Plants - 869; Viruses - 15; Other Eukaryotes - 248 (source: NCBI BLink).
Link
InterPro Scan - TAIR