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15-3686-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 199546 [Map]; Strand: w
      • AT2G01440.1 - [+] show detail - DEAD/DEAH box RNA helicase family protein
        Distance: -298; Region: promoter
      • AT2G01450.2 - [+] show detail - MAP kinase 17
        Distance: 0; Region: exon10 (3UTR)
      • AT2G01450.3 - [+] show detail - MAP kinase 17
        Distance: 0; Region: exon10 (3UTR)
      • AT2G01450.4 - [+] show detail - MAP kinase 17
        Distance: 0; Region: exon10 (3UTR)
      • AT2G01450.1 - [+] show detail - MAP kinase 17
        Distance: 0; Region: exon10 (3UTR)
    Flanking Genome Sequence: 15-3686-1 - 5-prime edge
    NNNAAATNGN CCNNCAGGGC NGNCGGANNG CGCGCGCNGG ANGNGGNCTA 
    TAGAATGNNG ANTNGACCNA CAGNATCTCN NNACNNGATG ANNNGCAACN
    GATGNGGCAG GANAGAATAC ACTAAGTNNG GAGCATACNA GCCTACCAAG
    CGACAGGGCC NGTAGGNNAG ACATGATGAN ANAATAGGCN GAACACAATA
    ATCAANGGTN TGCTGTTNAA CAACTNTGAG AAATCAATTN TTTNCTGACT
    ATGACACTGC NNAGGAGACA CCAACACATC TTGAAGCACA GATACTATCA
    CTCCTCATTA GACATGCAGA CCGTTTTACC GGAGNTGCTG CTNNATNTAC
    NTGTGACGCC TNCNGTGAGG ATAAGCCAGT TGCTGGGTNG GGAGTCTGGG
    GAGGNGAAAA NACCACTGAN NCGGAAGANG ATTGCGCACN ANNGCGNANA
    ACANGCTTCG CNATNGTGNG GAGAANANAC ANGNGGCGGN ACCNAACAAA
    NACAANGTAT TTGNAGNCCG GGNNCNCCNT ANNTTANGAG GGCNTGAGNN
    AGTNAAANCN ATTNNCCTCG GGTGGNGAGN GGGGGTNGNT TNTANNTNNN
    GNNAGGGGAG GAAGAAGGGG CCGAAGNNTC ANNGNGGGTN AGANGNCNNC
    GGCANANGGN AACNTGTGGG ACGCNAANNN GNNGACNNGG CNNNNNGNAN
    NNNGCGAAGT NNGCNNCANN NCCGGAGNGG NNAANNCNNC CNGCGNTNAG
    GCACGACAAG NNNANTNGGG

AT2G01440.1

Model type
Protein coding
Short Description
DEAD/DEAH box RNA helicase family protein
Computational Description
DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: ATP-dependent DNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA repair, DNA recombination; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA helicase, ATP-dependent, RecG (InterPro:IPR004609), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box helicase, putative (TAIR:AT3G02060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01450.1

Model type
Protein coding
Short Description
MAP kinase 17
Curator Summary
member of MAP Kinase
Computational Description
MAP kinase 17 (MPK17); CONTAINS InterPro DOMAIN/s: MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: MAP kinase 9 (TAIR:AT3G18040.1); Has 113085 Blast hits to 112072 proteins in 3455 species: Archae - 88; Bacteria - 12258; Metazoa - 41885; Fungi - 11781; Plants - 27798; Viruses - 485; Other Eukaryotes - 18790 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01450.2

Model type
Protein coding
Short Description
MAP kinase 17
Curator Summary
member of MAP Kinase
Computational Description
MAP kinase 17 (MPK17); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: MAP kinase 9 (TAIR:AT3G18040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01450.3

Model type
Protein coding
Short Description
MAP kinase 17
Curator Summary
member of MAP Kinase
Computational Description
MAP kinase 17 (MPK17); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: MAP kinase 9 (TAIR:AT3G18040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01450.4

Model type
Protein coding
Short Description
MAP kinase 17
Curator Summary
member of MAP Kinase
Computational Description
MAP kinase 17 (MPK17); CONTAINS InterPro DOMAIN/s: MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: MAP kinase 9 (TAIR:AT3G18040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR