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15-3697-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 839153 [Map]; Strand: c
      • AT4G01930.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-3697-1 - 5-prime edge 
    CTAAGATGCA TTGAAGATGA TTGTAGATTT GTCTTATGCT TCAAATGCGC 
    CACTCGACCA TANGTGGNNT ANNATAGAGT TGACAATCAT CCTCTCTCAC 
    TATGCTATGG CGAAAAGGCT AGTGACAAAT TCTGGTGTGA CATTTGTGAA 
    AAAGAAACCA ATCCAGAGAC ATGGTTCTAC ACGTGTAAAG ACCACCGGGC 
    TAGTTTACAT GCAAAGTGTG TCCTCGGAAA ATTTTTAGGG CTCATGCCAA 
    AAACCACATT AGAGCTTTGG AACAGATCAT ATGAGGTTGT ACTCAATAAT 
    AGTGTATCTC GTCCATTTTG CAGCTGGTGT GAGTTGCGTT GCATTTTTCC 
    TATCATCTTG AAGAGACTTG GAACCTCACA AAAATACTTT GCTCTATTTA 
    TTGCACTGCC GGAGATGTAT TAGCGAGTGG GGTTTCCTTA TAGATTTCTT 
    GTAACCATTT CTTTCATTAT AAGTTGATTT CCTTAATGTT TCAAATGTTT 
    TCTGACTTTC GTTTTCTACA AAATTTCACC TTGAAAATGA ACAACACAAT 
    ACTATCAGTC TTGCATTATC ATGATTGTCA CCTTTTTCGC TTCTTTCTCA 
    GGGTATTGTA TAGTCTGNTT CAAGATCATT AGGTAATAGT AAGNAAAGTA 
    AATTCTTGTT ACAAGAAGTC TTNACAATGG GCGTNTNNAA AGNATTCTTG 
    TTTAANATTG CTAACG

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 833264 [Map]; Strand: c
      • AT4G01925.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 15-3697-1 - 3-prime edge 
    GCACATCATA ACGGTTCTTC TTGCAGCCAT TGCAAATCTT AAACTCTTCA 
    TCTTCTGAAA TGCTATATAA GGGATGATCG GGATGACTTG GATGGACAAA 
    CGGCTCAGAT ATTGAACCGC ACCTAACATC GAATGTCAAA TACCCATGCN 
    TGGTACCTGA AACCATTGGA CAATCTTCTA CAAGCATCAC ACCTAAAAGG 
    TGTAGTCTTG TTAGTAACTA AAGTAAGACG CTCATTGTGT AGCATATGCC 
    ATTTCTTTCT AAGAAATCCA GCTCAATTTT GGTGGAGAAT AAAGTCACAA 
    TCCATACAGC CGTAGAAGGA TTGGAGACAG ATGGGATAAG TGCATGCCCT 
    GCACCGCATG TTGTCGTCAC AAAGAAAACC ATTATCGTGG AGTCCTAGGT 
    AATGCTTTTT GTGGCTGAAA TGTTGTATTG TATTTTCATC TATTACCACA 
    TATGGCTCTA TATCTTCTAT TTCTTCAGGT ACTCCTTCGA GTTCTTTTCC 
    GTTCCACACA TCTTCTCTAG TAGCACATTT TGAGTGAGCG ATATAGTCGG 
    GGCACCTCTG ACAAGAAAAA CCTCCACAAG TCTAGTCCAC CTTCTGACGA 
    CATACTCCAC AGACAGAGTT CACGACACCA AGAACAGAAG TGCGAGCAAC 
    ACGGTGATCA TGCCGATTGA TGTTTATGAG GCGNGGAAGG CCANACAATC 
    TTGATGGATC ATGAAACCAC ATTGAAAC

AT4G01925.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT4G01910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G01930.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, embryo, root, flower, seed; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT4G01910.1); Has 2022 Blast hits to 728 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 74; Fungi - 2; Plants - 1926; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).
Link
InterPro Scan - TAIR