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15-3702-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 94337 [Map]; Strand: w
      • AT2G01130.1 - [+] show detail - DEA(D/H)-box RNA helicase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 15-3702-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGCCTTTCAC TGTGCCGACT TGGATGATTG GAATAAGAGA TTTTCAATGC 
    TTTTGAAAGA TTCTTTAAAG CAAGAAGTTA TTTCCAGGGA GAAAAAAGAT 
    AGACGGGATT TTGATAAACT TGCTGCTCTG GCTACAACCC TGGGATTGTA 
    TAGGTACATC AATCATGCTG CTCCTTTCTT TCTTCTTTCT CACTAGTATA 
    ACCATTTCTG TTTCTTTTTT GCAGTCATGC ATATGCTAAG GTTGTTGTCT 
    TCAGTAAGAT CCCACTCCCC AACTATAGGT TTGATTTAGA TGACAAGAAG 
    CCACAGAGGG AGGTATTATC CGCTGCTCCT CACTCTCTTC TCTTACACTT 
    AACGCAAGAC GGCTTGTTTT TCTTTAAAGA GCAGATATAT ACAAAAATAT 
    TTACAGGTGA ATTTGCATAC TGACCTTCTT CAAAGAGTTG AAGCT

AT2G01130.1

Model type
Protein coding
Short Description
DEA(D/H)-box RNA helicase family protein
Computational Description
DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G48650.2); Has 13137 Blast hits to 8990 proteins in 1526 species: Archae - 10; Bacteria - 5358; Metazoa - 2929; Fungi - 1766; Plants - 978; Viruses - 93; Other Eukaryotes - 2003 (source: NCBI BLink).
Link
InterPro Scan - TAIR