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15-3755-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22275033 [Map]; Strand: c
      • AT3G60260.2 - [+] show detail - ELMO/CED-12 family protein
        Distance: 0; Region: intron2 (CDS)
      • AT3G60260.4 - [+] show detail - ELMO/CED-12 family protein
        Distance: 0; Region: intron2 (CDS)
      • AT3G60260.1 - [+] show detail - ELMO/CED-12 family protein
        Distance: 0; Region: intron2 (CDS)
      • AT3G60260.3 - [+] show detail - ELMO/CED-12 family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 15-3755-1 - 5-prime edge
    GGCCTAACCA CGCTGCCGAT CCAGCTACAA CCTCAGCTGC AATAAAATTA 
    AAATCAGAAT TGTGATGTTT TTTGATAAAG AAATGATTTC TTAATGCAAG
    AGGGTGACTA GTCAAACATC TTTTAGCNTG ACTTTTATAT TACAAATACG
    ATAACTAATA CGTGAGAAGC ATACAATGTC ATTTAAGCAT CAGACTTGTC
    AAAATACAGA ACGATGAAAG AAAAATCAAA GATTCCAGAA CACATCATCC
    ATTAGCTTCA ACTTATTCAC AATCAAAATT GAAGCAAGTA ACAAAAAATT
    TTAGCAAAAC ATGCTTCCAT GGAAAAACAA ACTAGCAATA TAGTCAAAAA
    GAGAAATGGA ATCTGCAGGG AAGAAGACTA ATCTCAACTA GAGAAATCAA
    CGCAAACAAT TTCGTATGGG AAATACTAAA AATAGGACTT ACAAAGAAGA
    TCAACACACA TAACAAAAAC TCCACGAATT TATGAGAAAG AGCAACGAAA
    AAGTAAATGG CGAAACGTAG ATCTGCGACA CTAAATCTCA GATAAAAAGG
    CAATCGCCAG CGAATACACA GAGAGAAAGA GAAAACGTGG AAAAAGTGGG
    AGAGAGAGAG AGAGAGAGAA ATAGAGATAG AGATGTATAA TGATGANAAA
    ACGCGTNTGT TCCAGAAGAG CAAAAAAAAT AGANAGAATC NTCGNNCANG
    GGGAGATGAA TTTNCCANAA AAAAAG

AT3G60260.1

Model type
Protein coding
Short Description
ELMO/CED-12 family protein
Computational Description
ELMO/CED-12 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: phagocytosis; LOCATED IN: cytoskeleton; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Engulfment/cell motility, ELMO (InterPro:IPR006816); BEST Arabidopsis thaliana protein match is: ELMO/CED-12 family protein (TAIR:AT2G44770.1); Has 836 Blast hits to 836 proteins in 135 species: Archae - 0; Bacteria - 0; Metazoa - 495; Fungi - 36; Plants - 182; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G60260.2

Model type
Protein coding
Short Description
ELMO/CED-12 family protein
Computational Description
ELMO/CED-12 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: phagocytosis; LOCATED IN: cytoskeleton; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Engulfment/cell motility, ELMO (InterPro:IPR006816); BEST Arabidopsis thaliana protein match is: ELMO/CED-12 family protein (TAIR:AT2G44770.1); Has 836 Blast hits to 836 proteins in 135 species: Archae - 0; Bacteria - 0; Metazoa - 495; Fungi - 36; Plants - 182; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G60260.3

Model type
Protein coding
Short Description
ELMO/CED-12 family protein
Computational Description
ELMO/CED-12 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: phagocytosis; LOCATED IN: cytoskeleton; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Engulfment/cell motility, ELMO (InterPro:IPR006816); BEST Arabidopsis thaliana protein match is: ELMO/CED-12 family protein (TAIR:AT2G44770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G60260.4

Model type
Protein coding
Short Description
ELMO/CED-12 family protein
Computational Description
ELMO/CED-12 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: phagocytosis; LOCATED IN: cytoskeleton; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Engulfment/cell motility, ELMO (InterPro:IPR006816); BEST Arabidopsis thaliana protein match is: ELMO/CED-12 family protein (TAIR:AT2G44770.1); Has 836 Blast hits to 836 proteins in 135 species: Archae - 0; Bacteria - 0; Metazoa - 495; Fungi - 36; Plants - 182; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink).
Link
InterPro Scan - TAIR