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15-3771-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 540434 [Map]; Strand: c
      • AT2G02130.1 - [+] show detail - low-molecular-weight cysteine-rich 68
        Distance: 0; Region: exon2 (3UTR)
    Flanking Genome Sequence: 15-3771-1 - 5-prime edge 
    CATGTACGGT ACGACATGGT ACCGTACGGA AGATTTAGAT AAGAAAGAAG 
    TAACACACTG ACGATGGATC GAAGATTTGA GTCATGAGAA TGGATGGATC 
    AGCAGTGTCT TGTGCAGTAG CAACGACGAC GGAATCCACG GCATTTACCT 
    CCGCCGAAGC CTTCGTTGTG GCACACGTTT GCACAGTTGT GTGTGCTCAC 
    ACATGGACCC TTGAACCTAT GGCTCTTTGA CTCACACGTG CGTGCCTCCA 
    CGGTGACTGG ACCCATCCCT AGAGAATATT AACACACACA CACACACAAA 
    AAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 540550 [Map]; Strand: c
      • AT2G02130.1 - [+] show detail - low-molecular-weight cysteine-rich 68
        Distance: 0; Region: exon2 (3UTR)
    Flanking Genome Sequence: 15-3771-1 - 3-prime edge 
    CGTACATGAG TGTTTTCTCA AATAAGTCGT TGGTTTGTGT GTTTCCGGTT 
    TTAATGTAAT GTTAAATCAA TTAATGGCTT TTAATATATT GTATTATGGA 
    TCTCAATCTA AAAGTTTTTA ATAACCGGAG TCTGCAAAGT AAATCACAAT 
    AATGCTCGAA TAGAATTGAG AGAACCGATC GATTATATAG AGTTAATCTG 
    GTTAGAAATT AGATTGGTAA CAAAAAGTCG TACAAATTTT TTAATTGTTA 
    GCTGTAGTTG TTAGTTTTAT CATGATACAA AACTGTTAGA AGTAGTTGTA 
    CAAAAAAATT GAGACTAAAA TTTTTTGTAA CGTTTTTGAT AAAACTTTTA 
    TGATTAGTAA ATATCAAACC TATATACACT ATTTTGGAAT ATTAAGTGAT 
    TACCATTCAA AATCAGTATA TAAAAAGATC ATTCACTGTG TAGATGAATA 
    GTATATAGCA TTGGTATTTG TAATGTAGAT GTTGGTTAAA TAATACCTCT 
    TTAAATAACA ACCTAGGGAA TGAATAAAAT CCAACATATC TAATTTCGCA 
    GTGTAAAGCA ACAAATGGAG AGTTTGCTAC TAGCCTACTA CACGTGTCTT 
    TGGTGTTACC TACAACTCAA CACATGTACT GCTTAATGGT ATTGTTAAAG 
    AAACATAAAT GTAGCTGTCA AAAAATACAT AGNGGCGTTA GCGACAGAAG 
    AAAAGACACT ATTGNAGTAC TGAGGTGAGG AAAAGCTTTT TTTNC

AT2G02130.1

Model type
Protein coding
Short Description
low-molecular-weight cysteine-rich 68
Curator Summary
Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.
Computational Description
low-molecular-weight cysteine-rich 68 (LCR68); FUNCTIONS IN: peptidase inhibitor activity; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Gamma thionin (InterPro:IPR008176), Knottin (InterPro:IPR003614), Gamma Purothionin (InterPro:IPR008177); BEST Arabidopsis thaliana protein match is: low-molecular-weight cysteine-rich 69 (TAIR:AT2G02100.1); Has 401 Blast hits to 401 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 401; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR