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15-3778-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 2960407 [Map]; Strand: c
      • AT5G09530.1 - [+] show detail - hydroxyproline-rich glycoprotein family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-3778-1 - 5-prime edge 
    CNTGATAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACCGGAGAT 
    CCAGAAGCCG GAGTTGCCCA AAATGCCGGA GTTACCTAAG ATGCCGGAGA 
    TTCAGAAACC CGAGTTGCCC AAGATGCCGG AGATTCAGAA GCCTGAGTTG 
    CCGAAGGTGC CAGAGGTTCC AAAGCCCGAA TTGCCAACGG TTCCAGAGGT 
    TCCAAAGTCT GAGGCTCCTA AGTTTCCAGA GATTCCAAAG CCTGAACTGC 
    CGAAGATTCC AGAAGTTCCA AAACCTGAAC TGCCCAAGGT TCCAGAAATT 
    ACAAAACCTG CAGTTCCAGA GATTCCAAAG CCAGAGCTAC CGACGATGCC 
    TCAACTTCCC AAGTTGCCGG AATT

AT5G09530.1

Model type
Protein coding
Short Description
hydroxyproline-rich glycoprotein family protein
Computational Description
hydroxyproline-rich glycoprotein family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G09520.1); Has 56710 Blast hits to 18930 proteins in 1860 species: Archae - 251; Bacteria - 17598; Metazoa - 17723; Fungi - 4561; Plants - 6151; Viruses - 953; Other Eukaryotes - 9473 (source: NCBI BLink).
Link
InterPro Scan - TAIR