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15-3783-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30137637 [Map]; Strand: w
      • AT1G80110.1 - [+] show detail - phloem protein 2-B11
        Distance: 681; Region: intergenic
      • AT1G80120.1 - [+] show detail - Protein of unknown function (DUF567)
        Distance: -1464; Region: intergenic
    Flanking Genome Sequence: 15-3783-1 - 5-prime edge
    GATAAACTAA CAAAATCGGT TATACGATAA CGGTCCATGA TACTGCTTAA 
    AAAATTTCAC TGCACTGTTA TCGTACAAAC AAAGAAGAAA ATACTATGCA
    ATTTCTGTAA TAATTGATGA CTGATGGGAA CGTTATGATT ATGTTATCTT
    CAACTATGGA GTGAGGATCT TTATTTCCAT ACTATACAGG CCACTCGATG
    GGTCTATTTG AAATAATGCA ATAGATAGAT AGATGTATAT ATACACACAC
    AACAAATATG TGTATTGTTT ATACGCTCCG GGATAAACAC ACATTTTCCA
    CACTTTTAAT TCGTTACCGT TTCAGGACCA ATTTTAAAAA GAAGGTTGGT
    ACTATACTAT TGACTAGCTA GCTGGTCAGG GACCTTGATG GTACATGGAA
    GTTTCATATT TTATACAGAA ACAAAATAAT AGAGAGTATA AGAATATCAA
    CGACGAGATC TGAGAAGATT TGTTTTCTCT TTTTTTGTTA TCAAATATGA
    GAAGATTTTG TAAATCTGTA AGTTTTAATT TATAAAAGTT GAGATGCAAT
    CCAGTGACTC CATTCTTTTA AAATCCACTA GTACTTAGTT ACCCTAATGT
    TAAACGTTGA AAAATGAGAT TTAGATTAGT TAACAAGNCT TTATAGTTAA
    CTAATCATAT AGGGGAATCA ATAATATGCA ACTTTTGATG
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30137554 [Map]; Strand: w
      • AT1G80110.1 - [+] show detail - phloem protein 2-B11
        Distance: 598; Region: intergenic
      • AT1G80120.1 - [+] show detail - Protein of unknown function (DUF567)
        Distance: -1547; Region: intergenic
    Flanking Genome Sequence: 15-3783-1 - 3-prime edge
    ATCATGGATT GTGAAAATCT TATAACTTTC ATTTAATAAT AAAGAGTTAG 
    AAGTTTTATA TAATTGAATT

AT1G80110.1

Model type
Protein coding
Short Description
phloem protein 2-B11
Computational Description
phloem protein 2-B11 (PP2-B11); FUNCTIONS IN: carbohydrate binding; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B12 (TAIR:AT5G24560.1); Has 567 Blast hits to 552 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 567; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G80120.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF567)
Computational Description
Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT3G15810.1); Has 439 Blast hits to 438 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 9; Plants - 430; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR