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15-3788-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
whole plant flowering stage (PO:0007016)
  • late (PATO:0000693)
    (Flowering & Growth::late flowering)
vascular leaf (PO:0009025)
  • desaturated green (PATO:0001272)
    (Leaves::pale green)

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 19127466 [Map]; Strand: c
      • AT3G51570.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 15-3788-1 - 5-prime edge 
    CTTGTATTAG TGATTTGTCG CTTGTTGCAA TGACAATCCT GCTTCCCTGC 
    CTAATCCAGT TGCATCTCCC CAGAAGAACA TCTATCTGTT CCTTGTCACT 
    CACATCGTCG AGAACAACAA GAACTTTATG TGTATGTAGT TCCATCTTGT 
    AAGATTCATA TGCACATCGA GTAGATTCTA TGTCTGGAAT TGTCACACCG 
    AGTAACTCTT CCAAGAGTAA TGCAGGCAAG CAATCCAACC CGTGCTCCTT 
    CGATGTTCTA CGAATATCTT GGATTAATCC ATGCCTTAAG AACTTGCACC 
    GCAAAGTTTC ATAAATCTCC CTTGCAAGAG TGGTTTTACC AATACCGGGC 
    ATCCCAACAA CTCCCAAAAT CCGAGTCTCC TCACAATCAA GATCTAGCTT 
    CTCCTTTAAT TCTTCTAACC GTTGTTTGAG TCCATAAATC TCGTGCTTTT 
    CTCTTCCTAC GGACATTGAA TTGTTTTTCG AATGATAGAC GAAAGCATCT 
    TTGGTTTTGT CCAACAACAT CTTGCTCAGG GCTTCTTTAA CCTCTTCAAC 
    AATACCATTG ATGAAGTTGT GCTCGTCGCT ACAAAAATCA GTAAGAAATA 
    AAGCCAGGCA GATCCTTATT GAGAAGGTCA AACTCTAACA AAGTCTCAAA 
    CTTGTGCTCT AGATAAACTC TATTAGGAAA CTAAAAAAAA GATACCTCTT 
    TCCATCAAAG GANAAGCCGA C

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 19127562 [Map]; Strand: c
      • AT3G51570.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 15-3788-1 - 3-prime edge 
    ATTGAAAACG GTAGAGGTAT TATACAAGNT GTGGCTGACT ATACTTATGT 
    TGTCCCACAG TTGAACCACA AAGACGGCTT AGGTCACTTT GGGCGTTATG 
    CCTTTGATCG TCATTCCAAC ATACACAACA ATGAAGTCAT CATGAAGCTA 
    TCGAAAGAGT TTGTGCATTA TGGTAGAGGT CATCCACTCG TTCTAAAGTT 
    GTTGGGGGCA GATCTTAATG GGAAAGACGA GGACCATTGG AAAACAAAAT 
    TGGCTACACT AGCAGAAAAT TCCAGCCAGA GTATTCGAGA TGTGTTACAA 
    GTAAGTTATG ATGAACTGAG TCAAGTGCAT AAAGATATAT TTCTCGACAT 
    AGCTTGTTTT AGATCGGAAG ATGAGAGTTA CATTGCTAGT CTACTGGATT 
    CATCTGAAGC TGCAAGTGAA ATAAAAGCTC TCATGAATAA ATTCATGATT 
    AATGTTTCCG AGGACCGAGT AGAGATGCAT GATTTGCTAT ATACTTTCGC 
    TAGGGAACTT TGCCGAAGAG CATATGCTCA AGATGGAAGG GGGCCACATA 
    GGTTGTGGCA CCACCAAGAC ATAACTGATG TGCTAAAGAA CATAGAGGTG 
    AGCCTAAACC AAGAAAACTT TTCATATATT TTACAAAGTT CTTCAAGACT 
    TACTGTATAT AATGAATAAT AGATTTGACG ACCGTGACTT GTCTCCCAGG 
    AAGGCGCAGA AGTCAGAGGG ATTTTCCTAA ACATGAATGA AATGAAGAGG 
    GAGATGAGCT TANACAGTTG CACTTTCAAA TCGATGCGTG

AT3G51570.1

Model type
Protein coding
Short Description
Disease resistance protein (TIR-NBS-LRR class) family
Computational Description
Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G45250.1); Has 19036 Blast hits to 14178 proteins in 545 species: Archae - 8; Bacteria - 1068; Metazoa - 1899; Fungi - 85; Plants - 15364; Viruses - 2; Other Eukaryotes - 610 (source: NCBI BLink).
Link
InterPro Scan - TAIR