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15-3794-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
petal (PO:0009032)
  • abnormal (PATO:0000460)
    (Flowers::petal)
stamen (PO:0009029)
  • abnormal (PATO:0000460)
    (Flowers::stamen)
stem (PO:0009047)
  • abnormal (PATO:0000460)
    (Branching::others)
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)
    (Seed yield::semi-sterile)

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7330851 [Map]; Strand: w
      • AT1G20990.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 15-3794-1 - 5-prime edge 
    ATAAACTAAC AAAATCGGTT ATACGATAAC GGTCGGTACG GGATTTTCCC 
    ATCCTACTTT CATCCCTCTC CGCAGAGGAA TCCTCCGGAG TCTCCGCCGG 
    TGGTGCTACC TGCTGAGGAA GAGGGGAGGA GGCGGAGAGG GTGGTGATGG 
    AGGGAGGAAG AGGAGAGGGA AGGAGATAAC ATGGCGCAGC CAGGATGCAT 
    TTGGAAACTG CAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7330800 [Map]; Strand: w
      • AT1G20990.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 15-3794-1 - 3-prime edge 
    GCGGAGAGTG CAAGAGAGGT AAGCGAACGG GGAGGGTTTA CCGTTGCACC 
    GTCTGTGATT ACCACTTGCA TGCCGTTTGT GCCAAAGACG CCGCCGTGAA 
    TGGCCTCCGA GCAAACGGAC ATAAAGGGAG GGATAAGTCT CCGGCAGTTT 
    TGGGAACGGC GGCAAGGTTG GCGTCGCAGG TTGTGATTGA TTTTCTCGGT 
    GGTATTATCG ATGGTCTTGG CGAAGGTGTT GGTGAAGCTA TTATAGACGG 
    TGTGACTAGA GGTGGTGGTG GTGGCGGAGG CGGAAATGGC GGTGCTACTA 
    GAGTAATCCC ACGTGTCAGA GGAGGGTAAT GGTGAAATTT GAGGATTGTT 
    TGATTAACTA ATTATGTGTG TTAATTATGT TTTGTATGTG GAGATTGCTA 
    TGACTTGATG ATGCTTTTGA TAAGTACATA GATGTGCTTG TATTTATTGA 
    GTTTGAGTTT GTGTGGGGGA TATATTATGT TGATTATATT CGGGGATATT 
    TACAATTCTA AGAAAATGTG TATNTGTTTA ATTAAATTGG ATTGATAANT 
    ANTATTNTTT NNCTNTTGTT TGTGTTTNGN TTTTNTTTAT CNAACNAAAN 
    AACAATTNNN NNTNTNNNTA ATNNCNCTTN TNAGTTCANN NNNNNNATTN 
    NNACNTTTNA TNNNNTNCNT NNATCAAANN ANTATAAAAC NTNNNNNANT 
    TTTTTNTTNT CANTTTTTCN ACNNCTNACC NATNTAANTN ANATNCTANA 
    ANAAT

AT1G20990.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G16050.1); Has 1603 Blast hits to 716 proteins in 35 species: Archae - 0; Bacteria - 2; Metazoa - 20; Fungi - 0; Plants - 1573; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Link
InterPro Scan - TAIR