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15-3803-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 73593 [Map]; Strand: w
      • AT2G01060.1 - [+] show detail - myb-like HTH transcriptional regulator family protein
        Distance: 0; Region: exon7 (CDS)
      • AT2G01060.2 - [+] show detail - myb-like HTH transcriptional regulator family protein
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 15-3803-1 - 3-prime edge 
    ATTTTGAAAA CAGGTAGAGG TATTTTACCG ACCGTTACCG ACCGTTTTCA 
    TCCCCGGTCA CCCAATACTA GAATCAGGCT TGAACACTTC TTACCATCAG 
    TCAGACCATG TCCTCGCCTT TGACCAGCCA TCTACATCAC TGCTTGGGGC 
    CGAAGAACAG TTGGATAAGG TTTCAGGAGA TAATCTTTGA GTTGTTGAGT 
    GTACCACATG TAGTGTTGTT TATCCTAATC CTTATTAGTT AGGAGTTTCC 
    TCTAATAATG TGATCACAAG TCGTTAATTC TCTAGGCACT ATCACGAGCA 
    TGAAGAATGA ATATGTCTGT GTTGTGCTGT AATTTGGTAA ACACAAAACA 
    AAATTACTCT TATTCCCAAC ACACTACATT CTTCTAAAGC TACTTTATCA 
    GAAACAGTAA CGCATGCCGC ATTTAAACAT ACACAGCTGA ATAACCTAGC 
    ATAAAGTTAG CTAGGCCTGG AGATGATCTC AAAACAGAAC ATTACAAATT 
    ATCACGTTAG TGAAGCCTGC ACCGTTCTGA AGGTTTGCAT ATTTGCTGGT 
    GCCTTGATAA TAAAGACTGG TGATGCGATC TCGAATGGTC TTGTCGATGA 
    CGGTAATGAN GTGAGTGCAC NGGGTTGTGT TCTTTATGGT ATTNTCTAGT 
    GTTACNNTCT NTCCAAACGT NGTNTTTTTA NAGGTNNTCC TAACTAAANT 
    TGCTCAAATN TAAATAAACT ATTCTNGGGA TNAGCAAAAT AAAAAGTTNA 
    NNNTTTCCTA AGANACAATG TGGNTTGCNN TTAAAANACN CTGTNTACTT

AT2G01060.1

Model type
Protein coding
Short Description
myb-like HTH transcriptional regulator family protein
Computational Description
myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04450.1); Has 1678 Blast hits to 1660 proteins in 60 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 1660; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01060.2

Model type
Protein coding
Short Description
myb-like HTH transcriptional regulator family protein
Computational Description
myb-like HTH transcriptional regulator family protein; BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT3G13040.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR