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15-3883-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8983605 [Map]; Strand: c
      • AT1G25560.1 - [+] show detail - AP2/B3 transcription factor family protein
        Distance: -564; Region: promoter
    Flanking Genome Sequence: 15-3883-1 - 5-prime edge 
    CTTGTATGGA CCATTCGATT TTTGGAAACT TCTTTTCTCT TAAAAAAACA 
    TCAATAATAT CGGGCGAAAT GTCAAATGTG GTTTTTCTTA GCCCTATTTA 
    CCATTCTTAA CCACATCAAG AATCTCATTG CTAGTGTTGT AATTATTCTT 
    TGTCCTTTAG TGAAAACATT AAGAAAAATC CATCTATTGA TGTTCACGTT 
    CTCTGTAAAT TTTTTATAGA CGCATGTTAC ACGTAATATA TTATTAGTTT 
    ATTACCATAT GAAGGGACTA ATTATGGCAA CAACAAGATT ATAAAAAAAG 
    GACTAATCAA AAGGTACCAA AATTAGTACG AATGTAATAA ATAAAATAAA 
    ACTTTATGAC ACTAGCACAC ATATTTTTGG ACTCTTCCCA CGAAACTTCC 
    TCTACAAAAC ACATTTTGCC ATTTGTTGCA AGACTTGACC CTACTCCTCT 
    GCACCTCTTC TCCTTTCTCT TTTATTTTAT TTTCACCTTT CTTTCATAAA 
    TACACATACA TTACCCACAT TTTACATTTA TCTCTTATTA TCCTATTCAA 
    TTTTGACAAA ACAAAACAAA TAATATCAAC AACGTACATG CACTTCCTTG 
    TGTATATATA TAAACTCCAA ACCCCATCTC TTCATAAAGC AACAAAAACT 
    TAACCCATTT CTTCTTCTTT TTTTGTTTCT CTCTCACAAA CACAACAAAT 
    ATGGAATACA GCTGTGTANA CNA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8983721 [Map]; Strand: c
      • AT1G25560.1 - [+] show detail - AP2/B3 transcription factor family protein
        Distance: -680; Region: promoter
    Flanking Genome Sequence: 15-3883-1 - 3-prime edge 
    CATACAAGAA TAGTAGTAGA AAGATATGTA AAATTATTGA ATAGAGTTGA 
    CTCGTTGAGA GATAGAAAAA TGAGTAATGG GCGATGTGTA ATAGCACAAA 
    TGGGGATAGA ATAGAGGGCC AAGTGGGAAG GGGGTTCACA TGAGATTTGG 
    ACCTTTTGTT TTGTTTTGTT GTGATTCTCT AATTAAATAG TGCATCCCCC 
    CTTTGATCAT GAGGCTTTTC TTGAAACTAT ATTCGTCCTT CCATATTTGG 
    AACATGACGT GTCTCTTTAC ATATTTTGCT TTAGTTGGGG AGGTCTTGAT 
    CATTAGGTTC TCTTATGTTT CCTACAAGTC CTTACCTAGT TTGGTTTTTA 
    TCCCCTAAGC ACTTTCTTTG TACGTAGAAT CATAGTACGT ATTGTTGCCT 
    TTCTTACGCA TTGTCTTCCT TTACGCTCAA TTTCTCAAAT TAACCAATAC 
    CACTCAAATA GGATATGTTT TCCATCCTAA TTCCTAAAGT GACTTTGTTC 
    GAAACATATA AGAACAACTA TTATTTTGAC GGGTATGAAA TGAGACGACC 
    TATAATAATA TTTTGAGATA ATGATAAGAC AACGTTGGAA TACGCCAGCA 
    AAGCCAAGAC TCGTGATCTA ATTGCCCACT ATTTTCGGTT TACAAAGAGA 
    AACAACATAT CTTATTGATC TTATTANAGT GACTAGTCCC TTCTTATCTA 
    TGCACGAAGC T

AT1G25560.1

Model type
Protein coding
Short Description
AP2/B3 transcription factor family protein
Curator Summary
Encodes a member of the RAV transcription factor family that contains AP2 and B3 binding domains. Involved in the regulation of flowering under long days. Loss of function results in early flowering. Overexpression causes late flowering and repression of expression of FT. Novel transcriptional regulator involved in ethylene signaling. Promoter bound by EIN3. EDF1 in turn, binds to promoter elements in ethylene responsive genes.
Computational Description
TEMPRANILLO 1 (TEM1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: photoperiodism, flowering, ethylene mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Transcriptional factor B3 (InterPro:IPR003340), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to ABI3/VP1 2 (TAIR:AT1G68840.2); Has 6413 Blast hits to 6197 proteins in 270 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 6380; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
Link
InterPro Scan - TAIR