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15-3932-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19682472 [Map]; Strand: w
      • AT2G48121.2 - [+] show detail - LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonu...
        Distance: 81; Region: intergenic
      • AT2G48130.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: 2594; Region: intergenic
    Flanking Genome Sequence: 15-3932-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA GGTTCATCAG TTTCAAATTT GTTGCTACCA 
    ATTCAAAGAG CTTCTTCTTA TGGTTGCATA CCTTGAGAAG AGAAACTGAA 
    TGTTGTGAGT AAAGTTTCTT CTTAAGGTAT TTTGTAGTTT CCAGGTCTGC 
    AAGTGAGTAA AGCTCCTGGT TAAATCCATG TATGAGCTGC ATCTCCCCAC 
    TTGAGCTCTT CTAAAGCTAC CCTCAGCGAA TGGAGTTGAA ATTGTGTTTA 
    GATGCAACAG GCTCCAATTT AGCTATAATC TGCTCAACAG CGTCTAAAAC 
    TGCAGCACCA TACATATCAG AGCTCGCAGA AGCAGCAGTA GGTGACGCGT 
    TAGGAACCTA TTAAGAGGCA ATCAAAACGA CAAGAGAGCA ATAACAGTGT 
    GTGAGGCATT TGGAACCTAT TAAGAGACCA CAAAAGATAA GAGAGAACAA 
    TATCAGTTTT GTCTTGGCCA AAAAGTCCAC TGAGTGCATG TAACCGAGTT 
    AGATGTACCT TGTATGTGCT TGATTCTGAC ACAAAAACTG ACTAAGGGGA 
    ATGACACAAC CTTTTTATGC AAATCCTTGA CCCATTTCAA CACCTCCATG 
    TGTCACCAAA ACAGTCCCAT TGGTGCAAAC ATGAACAAAA AGCACCGGCC 
    TGTAATAATA ATATGNGNTG GAGTAAGTAT CTTAAAATCC ANATTCTANA 
    TTTGCAGCCA ANGTAGTGCA ATGCTGANAT TTCCANAANC TN

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19682420 [Map]; Strand: w
      • AT2G48121.2 - [+] show detail - LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonu...
        Distance: 29; Region: intergenic
      • AT2G48130.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: 2646; Region: intergenic
    Flanking Genome Sequence: 15-3932-1 - 3-prime edge 
    CCTAAGATTA TACTGATGAA ACTCATTTTG CTAGTTTAAA GTTTTCAACT 
    TTTCACCAAA GGTAATGAAG TATTTAACTA CATAAATCAA ACCCAGTAGT 
    ATACTAAAAG ACATTAGACA AATGAGAGAG ACAGCTTCGA TTTTCAGACA 
    GCTTTAGGTT GGATTTGTTC GAAGTCGAAA ACCTCAAACA TGAGCCGCCG 
    AACATCGGGT TTCCCGTAGA TGGTGTAGGC GAGGCCGTGA ATGGCTTGTT 
    GAACAGCGGT TGTCGCCGGA TTCCTAAGTC TCCGGTTATG TTCATACCGA 
    TCATGAACCT CCTCTGAGTA TATTATAAAG TTGTGAAGAC GTTTTTCTCT 
    AAGATACCGG CCGCAGAATT TGTTCATTAA TAGACATCTA TGCTTCTCTT 
    GCAACCACTT CCCTGGTGCG TCCAAAACGT TCAGCCATTG CTATGTCCTG 
    CATGATCCCA AGACGAAAAA TCGGGTTAAA AAAAAGAAAG AAAGAAAAGA 
    ACCGTTCTTT TGATCTTTTA AGATGAGAGA TCGTTATCCT CACCTGTATC 
    TTCTGTCCTA CATATTCCAG CCGCTCAAAA CAAAACCGCG GGTGTTCAAA 
    CTTATGCTTT GAAGGATGCA AGAAGCANAN CTGTCACTTT AAAATCTCAT 
    AGTATTGAGG NCCATTANTG GCTTCACCTN GGCCCATTTA TNCNGGTTTT 
    TTTGATTCTG AGATCCAAAA ATNNGTCGNT TTTACTNGT

AT2G48121.2

Model type
Protein coding
Computational Description
LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAIR:AT4G37510.1).
Link
InterPro Scan - TAIR

AT2G48130.1

Model type
Protein coding
Short Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22600.1); Has 1201 Blast hits to 1197 proteins in 63 species: Archae - 0; Bacteria - 8; Metazoa - 1; Fungi - 0; Plants - 1190; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR