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15-3963-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9787491 [Map]; Strand: c
      • AT1G28070.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 3493; Region: intergenic
      • AT1G28080.1 - [+] show detail - RING finger protein
        Distance: -2335; Region: intergenic
    Flanking Genome Sequence: 15-3963-1 - 5-prime edge 
    TATACATGGG AATATATACA TATATATAAC CAGACCTAGT AGATCCAGGA 
    CCGAAACCCA ATTTACATTT ATAAAACGGA ATATTTTTGC TATTTAAGAC 
    GTTTATAGTA AGCAGTAGCA AAGGTGAGAC CACCATAATT GTCGTCGATA 
    GTGAAACTCA ATCTTTAACT TTGAATCATA TATAAAGTTT TCTATCATTT 
    CGAACAAATT ATTGAATTAC ACATTCATAT ACATAACATT TTTTTTCTTC 
    CTGATTATAT ATATATACTT TGCACTCCGA ATGTTTTTAC ATTTTAGTTC 
    TATCCCTACA TGCATGCATC TAAGTTGTAT ATAATTGTGA AGTCGTCTTT 
    GGTGCCGCTG TCACTTTCTT ACCTTCCGAA GAGCTATTAT ATGCTTTTTG 
    GATCAATATC AACTGAAATT ATACCACAAA TACAGTCTAT AGNGGTCGAC 
    AAAAAAGGTA GACAACAGCC GAATCCTAAG GGGGGAGTTT ATCTACGTAT 
    CGAGTTCGAG TTTTACCGTA AATATTGATA TGTTCCTGTC TTCTTGAACT 
    TGAACATATT ATGTATCGAA TGTTTGAAGC T

AT1G28070.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33510.1); Has 85 Blast hits to 77 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G28080.1

Model type
Protein coding
Short Description
RING finger protein
Computational Description
RING finger protein; BEST Arabidopsis thaliana protein match is: RING finger protein (TAIR:AT5G13250.1); Has 133 Blast hits to 133 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR