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15-3969-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8948758 [Map]; Strand: c
      • AT1G25480.1 - [+] show detail - Aluminium activated malate transporter family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-3969-1 - 5-prime edge
    GTGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTCCCAAACA GCATACTTGC TAGCGTCACG GAGTGGTTCT
    TTAAGGTAGA TGACGAAAGA ACAGAGTGCG AGAGCCATCC CCATCTTAAC
    GGAGAAGTAA ACTTTCCGAC GATCGGAACG ACCCATCTCG TATAATTTAG
    CACCGATGTC GTATAAAGCT
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8948813 [Map]; Strand: c
      • AT1G25480.1 - [+] show detail - Aluminium activated malate transporter family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 15-3969-1 - 3-prime edge
    GTTTGNGCGA TCCTTACTGT TGTCGTCGTC TTTGAGTATA GTATAGGTAC 
    TGTGACTCAC GAATT

AT1G25480.1

Model type
Protein coding
Short Description
Aluminium activated malate transporter family protein
Computational Description
Aluminium activated malate transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to aluminum ion; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT1G68600.1); Has 866 Blast hits to 864 proteins in 262 species: Archae - 0; Bacteria - 474; Metazoa - 0; Fungi - 26; Plants - 341; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link
InterPro Scan - TAIR