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15-4037-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 6025972 [Map]; Strand: c
      • AT2G14220.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 15-4037-1 - 3-prime edge
    CTCGTAGAGG ATGAAGAAGC AATGTTTGTA TCTGGGCTGG ATAATGAAGA 
    TGGACTTGAA TCAGTTAGTG GGCTTTTGCC CTTATCGGGC CTATCTTCAA
    TTTCAGCTAA TGGGTTCATA CTGAATGAAG CCCATAACTC TTCTTCTTCT
    TCGTGTACAG GAGAAGCCGA TGATGAAGAT GACTTATCAA ACGGAAACTG
    ATCTTCGCAG AACACCACAT CGCGAGAGAT GAAAAACTCC TCTGTTTCGC
    AATCATATAG CCTCCAACCC TTTTTGCCAT ATGGATAGCC AACAAACACA
    CACTTTCAAC TTCTCGATTC AAACTTGTCT CCCTTATGAC CTTGATTATG
    AGCATAGCAC AAGCTCCCAA ATACTTTGAG ATGTGTATAA TCGGGCTCTT
    TCTTATACAA TTTCTCATAT GGTGTTAGAC CATTCAGAAC TGATGAAGGA
    ATACGATTAA TTAAATAACC AGCTGTGAGG ATACACTCAC CCCAAAATTG
    GATTGGTAAG TGTCCTTGAA AGCGCAATGC TCTTGCCACA TTCAGAATGT
    GTCGGTGTTT GCGTTCGGCT CTTCAATTTT GTTGTGGTGT ACCCACACAG
    GAAGTCTCTT AAAGAATCCC TTGCTGTCGA AAATAGTTTG CCAAACTTGT
    GAACTCGGTT CCATTATCAC TGCGAAAACT CTTTACTCTT GTTGAAAACT
    GCGTTTCTAC CATGGCAATA A

AT2G14220.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 1.6e-167 P-value blast match to GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)gi|4996361|dbj|BAA78423.1| polyprotein (Arabidopsis thaliana) (Ty1_Copia-element)
Link
InterPro Scan - TAIR