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15-4063-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 81132 [Map]; Strand: c
      • AT2G01090.1 - [+] show detail - Ubiquinol-cytochrome C reductase hinge protein
        Distance: 0; Region: exon4 (3UTR)
      • AT2G01090.2 - [+] show detail - Ubiquinol-cytochrome C reductase hinge protein
        Distance: 0; Region: intron4 (3UTR)
      • AT2G01100.2 - [+] show detail - unknown protein; Has 19420 Blast hits to 10641 proteins in 779 species: Archa...
        Distance: -304; Region: promoter
      • AT2G01100.1 - [+] show detail - unknown protein; Has 19420 Blast hits to 10641 proteins in 779 species: Archa...
        Distance: -305; Region: promoter
      • AT2G01100.3 - [+] show detail - unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Arch...
        Distance: -308; Region: promoter
    Flanking Genome Sequence: 15-4063-1 - 5-prime edge 
    GNGATAAACN AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAG TAGTAATGTT AAGCATCCAC ATCATTTTAT 
    ATAACCCTAG AAAGAAAAAT AGACACAGAC TCAAGACTCC AAGTAGCTGT 
    CTTTGTCATT TTAGTTTCGC GAACAACTTA GGTCCGACCT GCAGATGAAC 
    AATACATCAT AGAATGAAAC TTTAGGTGTA TACAGAAAAA CAACACTCAC 
    ACACTTACAC ATTTGTCAAC ACAATGCCAG TAATCAAAAT ACTGCCCAGT 
    GCAATGTTTG TGGCCAGACT CATCATCTTG GATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 281235 [Map]; Strand: w
      • AT2G01630.1 - [+] show detail - O-Glycosyl hydrolases family 17 protein
        Distance: 0; Region: intron1 (CDS)
      • AT2G01630.2 - [+] show detail - O-Glycosyl hydrolases family 17 protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 15-4063-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAG 
    TTGACGGATT TTCATGTGAA TTGTTTCGTT TTAAATATGT TATTTCAGAT 
    TCTTTGATCG GTGTGAATAT TGGTACTGAA GTGACAAACA TGCCAAGTCC 
    AACACAAGTA GTAGCACTCC TCAAATCACA GAACATCAAC CGCGTCCGCC 
    TCTATGACGC AGACCGCTCA ATGCTTCTCG CGTTTGCTCA CACCGGGGTT 
    CAAGTTATAA TCTCAGTACC TAACGACCAG CTTCTCGGTA TCAGCCAATC 
    AAATGCAACC GCAGCCAATT GGGTGACTAG AAATGTAGCT GCATATTACC 
    CTGCGACCAA CATTACCACA ATTGCTGTCG GATCAGAAGT CCTAACCAGC 
    CTAACAAACG CAGCTTCTGT CCTTGTCTCA GCCCTCAAAT ACATACAAGC 
    TGCTCTCGTC ACGGCCAATC TCGACCGTCA GATCAAAGTA TCGACACCGC 
    ACTCTTCAAC CATCATTCTT GATTCTTTCC CTCCTTCGCA AGCT

AT2G01090.1

Model type
Protein coding
Short Description
Ubiquinol-cytochrome C reductase hinge protein
Computational Description
Ubiquinol-cytochrome C reductase hinge protein; FUNCTIONS IN: ubiquinol-cytochrome-c reductase activity; INVOLVED IN: mitochondrial electron transport, ubiquinol to cytochrome c; LOCATED IN: mitochondrial respiratory chain complex III; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquinol-cytochrome C reductase hinge (InterPro:IPR003422); BEST Arabidopsis thaliana protein match is: Ubiquinol-cytochrome C reductase hinge protein (TAIR:AT1G15120.2); Has 146 Blast hits to 146 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 4; Plants - 87; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01090.2

Model type
Protein coding
Short Description
Ubiquinol-cytochrome C reductase hinge protein
Computational Description
Ubiquinol-cytochrome C reductase hinge protein; FUNCTIONS IN: ubiquinol-cytochrome-c reductase activity; INVOLVED IN: mitochondrial electron transport, ubiquinol to cytochrome c; LOCATED IN: mitochondrial respiratory chain complex III; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquinol-cytochrome C reductase hinge (InterPro:IPR003422); BEST Arabidopsis thaliana protein match is: Ubiquinol-cytochrome C reductase hinge protein (TAIR:AT1G15120.2).
Link
InterPro Scan - TAIR

AT2G01100.1

Model type
Protein coding
Computational Description
unknown protein; Has 19420 Blast hits to 10641 proteins in 779 species: Archae - 0; Bacteria - 1003; Metazoa - 10257; Fungi - 1826; Plants - 1570; Viruses - 56; Other Eukaryotes - 4708 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01100.2

Model type
Protein coding
Computational Description
unknown protein; Has 19420 Blast hits to 10641 proteins in 779 species: Archae - 0; Bacteria - 1003; Metazoa - 10257; Fungi - 1826; Plants - 1570; Viruses - 56; Other Eukaryotes - 4708 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01100.3

Model type
Protein coding
Computational Description
unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01630.1

Model type
Protein coding
Short Description
O-Glycosyl hydrolases family 17 protein
Computational Description
O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT1G66250.1); Has 2926 Blast hits to 2856 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 93; Plants - 2819; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01630.2

Model type
Protein coding
Short Description
O-Glycosyl hydrolases family 17 protein
Computational Description
O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT1G66250.1); Has 2147 Blast hits to 2131 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 5; Plants - 2133; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR