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15-4076-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15451734 [Map]; Strand: w
      • AT2G36835.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -308; Region: promoter
      • AT2G36840.1 - [+] show detail - ACT-like superfamily protein
        Distance: 0; Region: exon6 (3UTR)
    Flanking Genome Sequence: 15-4076-1 - 5-prime edge 
    GATAAACTAA CAAAATCGGT TATACGATAA CGGTCGGTAC GGGATTTTCC 
    CATCCTACTT TCATCCCAGT TAATCTACAT ACACTCATTG CATCATAAAG 
    TGACAAATCT TATAGCCATA CTCTTTCGAT GAGTCTGAGG TTAGCTAATG 
    GTCCTATACT CTGAAAGATT TTCATTCCCA GCCCATCAAA GTTTTCCATA 
    CTTTCTTCCT CTATCTTGCT TCTCGGGATT GGTAAGCTGT CTTCTTCGTT 
    GATCAACACT TTGTACACCT CCCATTCTCT GTCTCCAGTC ACGTGTCTTC 
    CAATTTCAGC CTAGTAAAGA CATCAGATTC ATCGATATTT AGATGATACA 
    AAAATGGACT GTTTTTGGTA TGAGCTCGAA TGATGTGATT GGGTGAGTTA 
    TATTATACCG AGAAGATGCA GGTATCGATC TTCTTGAGGG CAAGTGCTAT 
    GTCGTGGAAG ACTTGTGGCC GTCCCTTTCC TGATAACTCA ACTGGGTTTG 
    TGACTAGAAG TTCAGTATCT GGACCTCGAT TCATCATTAC CACTCTCAGA 
    GGTTGCTGTA GCTCTGCTCT TAAACGAGTA ATCAATGCAT TTAGCTTGCT 
    CGAGTCAAGG ATCTTTCGGC CATCAGATTG CACTATGAAC AAGTCGATCT 
    CACAGTTCTT TCCTCGTTTG ATTGTAAAAC GCCCATATGA GATCTGATCA 
    TCAAATAAGA TTTGAGAAAA CGAGTCTCAT GTAAATAACA GTCGCAAGGT 
    TTAAGCAAAG CATATGAATT GAAGGGTCAG AAAAACCCAT TAAAN

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15451734 [Map]; Strand: w
      • AT2G36835.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -308; Region: promoter
      • AT2G36840.1 - [+] show detail - ACT-like superfamily protein
        Distance: 0; Region: exon6 (3UTR)
    Flanking Genome Sequence: 15-4076-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
    ATTAATATGA TACGAGGAGA TATATCTGAT AAGCCACAGT GTGTATATAT 
    GGTTTGAGTC TTTCTTTTTG TGTTGATGAG AAATTGTAAG TAGAGAAAAG 
    CAGAACGTTG GAATGTTGTA AATGAGTACT GTGTGGGTTT CATAGTAAGA 
    AGCTAAAGTT TTTCTCTTTG TTGTATTGAG CTGAGATTTT TCTCATATTA 
    TATGAAGTGA GTGGCTATAT CGTAATTAAA CACTTAATGA GGGGCAAAAA 
    GTGAAGGAGA AACCTAAGAA AAATGGCGAC TCTTTAAGAA GCACACGAAG 
    ACAATCCGAA AGCTGACCAC AAAGTTTTCT ACTTTGCAAT TTAGATAAAT 
    CTTTCTATCC ACTTTGAGAA TAAATTAAGG GCTCTCAATT TCGAATT

AT2G36835.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G36840.1

Model type
Protein coding
Short Description
ACT-like superfamily protein
Computational Description
ACT-like superfamily protein; FUNCTIONS IN: amino acid binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain-containing protein (TAIR:AT2G39570.1); Has 798 Blast hits to 670 proteins in 149 species: Archae - 0; Bacteria - 272; Metazoa - 0; Fungi - 7; Plants - 430; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink).
Link
InterPro Scan - TAIR