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Mutant Lines
15-4081-1

15-4081-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 8335050 [Map]; Strand: w
- AT1G23480.1 - [+] show detail - cellulose synthase-like A3
  Distance: 0; Region: intron5 (CDS)
- AT1G23480.3 - [+] show detail - cellulose synthase-like A3
  Distance: 0; Region: intron3 (CDS)
- AT1G23480.2 - [+] show detail - cellulose synthase-like A3
  Distance: 0; Region: intron4 (CDS)

GATAAACTAA CAAAATCGGT TATACGATAA CGGTCGGTAC GGGATTTTCC 
CATCCTACTT TCATCCCTTA CATGTAGTGA ATGCAAACGA GTGCTTAATG 
ACAAGAATGC AAGAGATGTC ACTAAACTAC CATTTTGTTG CTGAACAAGA 
ATCTGGATCT TCAATACATG CTTTCTTTGG ATTCAATGGA ACCGCGGGTG 
TATGGAGAAT CGCAGCTTTA AACGAAGCTG GAGGATGGAA AGATCGAACA 
ACCGTAGAAG ATATGGATTT AGCAGTAAGA GCTTGTCTTC ATGGTTGGAA 
ATTTGTCTAT GTCCATGACG TCGAGGTACT ACTACTATAA CCCTTTTAAA 
CTCAAGCAAA ACATAACAAG ATTTCAATCA AGACATTATT AAGTAATCTA 
ACATTTCAGG TGAAAAATGA ATTGCCAAGT ACATTCAAAG CATACAGGTT 
TCAGCAACAT AGATGGTCTT GTGGACCAGC TAATCTATGG AGGAAGATGA 
CAATGGAAAT CTTACAGAAC AAGAAAGTGT CGGCCTGGAA GAAATTGTAT 
CTCATATACA ATTTCTTCTT CATAAGGAAG ATTGTAGTAC ACATCTTCAC 
ATTTGTCTTC TACTGTCTGA TATTACCAAC AACTGTGCTA TTCCCTGAGC 
TCCAAGTTCC TAAATGGGCA ACTGTTTATT TTCCTACTAC AATCACTATC 
CTTAACGCAA TCGCTACACC TCGGTAACAA CATCTCTACT GTTCAAGTAA 
AACTCTGTTT TCTCATTTCC TAGTATGATA AAAAGTTTG

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 8335042 [Map]; Strand: w
  - AT1G23480.1 - [+] show detail - cellulose synthase-like A3
    Distance: 0; Region: intron5 (CDS)
  - AT1G23480.3 - [+] show detail - cellulose synthase-like A3
    Distance: 0; Region: intron3 (CDS)
  - AT1G23480.2 - [+] show detail - cellulose synthase-like A3
    Distance: 0; Region: intron4 (CDS)
Flanking Genome Sequence: 15-4081-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
TCATTCTCTC CATTAGCCAA TTTGACTTAA CAAAATAATA ACTATTATTT 
TTCAAAAAGA TATGACTTTA CCAAACTTCC AACGGCATTG AACAAGGGAG 
ATTTCATGGT TGTGAATAAG AAAAGGAATG GTTCGTTCAA GAAAGTCAGG 
ATCAGGCNTG AAAATCAGCA TCGAAAATGG CGACGAATT
```

AT1G23480.1

Model type: Protein coding
Short Description: cellulose synthase-like A3
Curator Summary: encodes a gene similar to cellulose synthase
Computational Description: cellulose synthase-like A3 (CSLA03); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT4G13410.1); Has 4758 Blast hits to 4752 proteins in 1373 species: Archae - 199; Bacteria - 3673; Metazoa - 9; Fungi - 91; Plants - 500; Viruses - 11; Other Eukaryotes - 275 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G23480.2

Model type: Protein coding
Short Description: cellulose synthase-like A3
Curator Summary: encodes a gene similar to cellulose synthase
Computational Description: cellulose synthase-like A3 (CSLA03); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT4G13410.1); Has 4744 Blast hits to 4738 proteins in 1369 species: Archae - 198; Bacteria - 3660; Metazoa - 9; Fungi - 91; Plants - 500; Viruses - 11; Other Eukaryotes - 275 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G23480.3

Model type: Protein coding
Short Description: cellulose synthase-like A3
Curator Summary: encodes a gene similar to cellulose synthase
Computational Description: cellulose synthase-like A3 (CSLA03); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT4G13410.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR