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Mutant Lines
15-4101-1

15-4101-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 7653971 [Map]; Strand: w
  - AT1G21780.2 - [+] show detail - BTB/POZ domain-containing protein
    Distance: 0; Region: exon4 (3UTR)
  - AT1G21780.1 - [+] show detail - BTB/POZ domain-containing protein
    Distance: 0; Region: exon5 (3UTR)
  - AT1G21790.1 - [+] show detail - TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
    Distance: -213; Region: promoter
Flanking Genome Sequence: 15-4101-1 - 5-prime edge
```
GNGATAAACT AACAAAATCG GTTATACGAT AACAAAATAG TGTGTGTAAC 
TAACAACAAC TCTGGATTTT GTTGTATCAC TCTGTCTAAT GTATAGTATT 
GAGTGGATTT GCCTCTAGTT TGGTGTACCG AGCCTCTCAA ATGGGCCGAG 
CCTTTCAAAT GGGCTGTGAC TAGGCCTAAT GACTGTCGAC ATCGAATGTC 
GGCACAAAAT ATGATAATTT TGTCGATGTT GAAATCGTAC GTTTTTTGTT 
TTAATTAGAT GAGTCAGCAT CAGGAGGATG AAGTATCGAC CGACACGTGT 
CCGTTGCGTC CCAAAGTAAA GCT
```
3 prime edge [+] show sequence
1. Chromosome: 1; Position: 7653941 [Map]; Strand: w
  - AT1G21780.2 - [+] show detail - BTB/POZ domain-containing protein
    Distance: 0; Region: exon4 (3UTR)
  - AT1G21780.1 - [+] show detail - BTB/POZ domain-containing protein
    Distance: 0; Region: exon5 (3UTR)
  - AT1G21790.1 - [+] show detail - TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
    Distance: -243; Region: promoter
Flanking Genome Sequence: 15-4101-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
CACACAGAAG AGAACAAGAA GACTATAAAC AAAACACCAT CAAGCTGAAA 
TGTTCAAAGT ATGTGTGTAA GTGTATATTA GACCGGTTTC CACACAGACA 
AAACCTCTTG AAACATCTCC AGCATCAGTT CTCGATCAGC TTGCCTGAAG 
AAACTGCTGA TTTCTTCTCT GACATCATAA ATCTTTCCGA AATCAAACAA 
ATACATCAAA CACCCTTTCT TCAGTTTCTC CAGCTGATAA AGCCAAGCT
```

AT1G21780.1

Model type: Protein coding
Short Description: BTB/POZ domain-containing protein
Curator Summary: BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B.
Computational Description: BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G55760.1); Has 5195 Blast hits to 5164 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 3886; Fungi - 25; Plants - 983; Viruses - 68; Other Eukaryotes - 233 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G21780.2

Model type: Protein coding
Short Description: BTB/POZ domain-containing protein
Curator Summary: BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B.
Computational Description: BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT1G55760.1); Has 5195 Blast hits to 5164 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 3886; Fungi - 25; Plants - 983; Viruses - 68; Other Eukaryotes - 233 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G21790.1

Model type: Protein coding
Short Description: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
Computational Description: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); Has 174 Blast hits to 174 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 105; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link: InterPro Scan - TAIR