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15-4181-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1215396 [Map]; Strand: c
      • AT1G04470.1 - [+] show detail - Protein of unknown function (DUF810)
        Distance: -734; Region: promoter
      • AT1G04480.1 - [+] show detail - Ribosomal protein L14p/L23e family protein
        Distance: -699; Region: promoter
    Flanking Genome Sequence: 15-4181-1 - 5-prime edge 
    GNGATAAACN AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCTTC ATAATCTTCT GTTATAGTTG TTTTCATAGA 
    ACTCAATTTG ATTAGCAATA TTTGTCGAAT CCTAAAATCT GAAATTGCTT 
    GAGGATTATG AGATTCCATA TTTCTCAAAG TTAAAAGATA ACNTGAAAGA 
    ATCAATGATC AGGTCCTGAC CAGTGCCACN TTGATTGATG TATAGTTGAC 
    CTTAATTGAA AGTTTGAAAC AAATCCCATC ATAAGATCAT AAAAAATATA 
    GTTATCCAGT TAACAATTAA AGGACACCGT TTAAGTAACT GCTGCAGACA 
    GAATTGAGAT TAAGTATTGA CCCGAATCTT ATCTTCTTTT CTCCGGATAC 
    ATCAACTACA ACAACAACCA GGTGCAAAAG TATGTTGAGT AACAAGTTTC 
    CCAACAATGT TTTATGCTGG ATTCTGTTGT CAACAAAAGT GAGGTTGGAT 
    TTTGTTTTTC TCTCTCAAAA GATTGTGTAT ATGGAAGAGA ATACATATGG 
    AATTTACGAA AAACAAGAGA TTCGGCTTGG CAAAAGTTAC TTGGAATAGG 
    AGATTTGCTA ATTATGGTTA AGTTTTCATG AGGCTTCCTC ATTTTACTCA 
    CATCCTCTCT CCTTCCTTAN CACAGAGAAA TTTGTTGTCG CCTAGCTTTT 
    TCCAAGTNGT CTCTCGTCTT CCTCCACCTN CTCATTTTTC TCTGTTNTTT 
    TGGNCGNGGG CTCTNATTTT CCCNTATTAA AACNCANAAC NCCTTCTCTC

AT1G04470.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF810)
Computational Description
CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT2G33420.1); Has 201 Blast hits to 187 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 4; Plants - 177; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04480.1

Model type
Protein coding
Short Description
Ribosomal protein L14p/L23e family protein
Computational Description
Ribosomal protein L14p/L23e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14b/L23e (InterPro:IPR000218), Ribosomal protein L14 conserved site (InterPro:IPR019972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14p/L23e family protein (TAIR:AT3G04400.1); Has 9301 Blast hits to 9300 proteins in 3178 species: Archae - 321; Bacteria - 5427; Metazoa - 383; Fungi - 266; Plants - 815; Viruses - 0; Other Eukaryotes - 2089 (source: NCBI BLink).
Link
InterPro Scan - TAIR