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15-4210-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 95344 [Map]; Strand: c
      • AT4G00230.1 - [+] show detail - xylem serine peptidase 1
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 15-4210-1 - 5-prime edge 
    CGCCCAACAA ACCTTGTACA TCGCTAACCT CGCCGACGGA ACCGCGCCGC 
    GGGCCGGTGC CGTTTGCTAT GCCATAGAGA CTCGCGTTTG CGACTAAAAC 
    GCCGGCTACG GTGGATGATG TGTGCGTCCC ATGGCCGTCG ATATCGATCG 
    GCGATCGAAC TTCGCCGGCA GGCACATTGC CGTCGTGCTT GAAGTACTTG 
    GCGCCGATTA TTTTGCTGTT GAAGTTAAAT TAATTAAATA TTTCTTATTT 
    CAATCAGAAC CCTTATGTTA ATGCATAATT CTAATTTGCT CCCTAAACTC 
    TTAAATTTAT CAACTAACTC CTTATGTTAA CGCATAATTC TAATTTGTCT 
    CCCTAAACTC TTAGATTCGT CAACTAACTC CTTATTTGTT TTTCTAGCAA 
    TGACATTTTC TTTAACAATT GCTCAAGAGT TCATGTTGCT TAGAGATCAA 
    GATTCTCTAG TGATCAAAGT TTGTATTTAA AATCGATTAA AGTAGAAAAT 
    GGTAAGAGAT AAATTGTATA CTTGTTGCAT CCGGTGAAAT TTTTATAAGG 
    TCCACAAGAT CCTTTCCATT TAGCCGGAGG AGGTCCTANA CCATGGTCTA 
    GGAAACTCTC TGAGTCTGGC GTTATTCCTG ATTGTTGNAT TATAGGAAGG 
    TTTANATAAT TATANGAAGC ATAAATGAAT AATATCNAAT CAATTTGCAT 
    ACAGAAAAAA TAACCTGTAT CAAGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 95460 [Map]; Strand: c
      • AT4G00230.1 - [+] show detail - xylem serine peptidase 1
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 15-4210-1 - 3-prime edge 
    GTTGGGCGAG ATCCGGATGT GCCGACATGG ACATACTCGC CGGATTCGAA 
    GCAGCGATTC ATGACGGCGT AGACATTATC TCCATCTCTA TCGGCGGTCC 
    AATCGCCGAT TACTCTTCCG ATTCGATATC CGTCGGGTCG TTTCACGCGA 
    TGAGGAAAGG GATC

AT4G00230.1

Model type
Protein coding
Short Description
xylem serine peptidase 1
Computational Description
xylem serine peptidase 1 (XSP1); FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilisin-like serine endopeptidase family protein (TAIR:AT5G03620.1); Has 8915 Blast hits to 7721 proteins in 1255 species: Archae - 263; Bacteria - 5173; Metazoa - 170; Fungi - 606; Plants - 1952; Viruses - 0; Other Eukaryotes - 751 (source: NCBI BLink).
Link
InterPro Scan - TAIR