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15-4256-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1349851 [Map]; Strand: w
      • AT1G04800.1 - [+] show detail - glycine-rich protein
        Distance: -565; Region: promoter
      • AT1G04810.1 - [+] show detail - 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit
        Distance: -329; Region: promoter
    Flanking Genome Sequence: 15-4256-1 - 3-prime edge 
    GATTGATGAC ACCTAAAAAG CTAAAGCTCA CAAATAAATG AAATCACATT 
    TTAGGGTTTA TATAGATAGT TCAATATTCC ATAGATTGAC ATGGCCTGTC 
    CTCCAACCCA TAAAGCGACT ACATCTTTTA TCAAGTCAGA ATTATTTTCT 
    AGTAAATATT TTCTCTTAGA CCATACGAGT TTTCACTTAA TATGAAATTA 
    TGAATAGACA TGCAGAAACA TTTTCATTTT TAGTTATTGC CCTCTGAAAC 
    CTGGACAACC TTCAAATTAA ATTTTAATAT AATTGATATG AATGTATGAT 
    TAATATAATT CAAGGAACTG TATATAATAA TTGGTGTCAT ATGTTCTTCA 
    ATTTTTCAAC TATATTTGCA TCATATTTTT CTCTTTGTGT TGGATGAGAT 
    CAATATGGCA GTTGGGCAGA CAATGAAACA TAAAACTTGT CCAGTGACCG 
    GTGAAACATC TTTAACTGTT TTTACTCAAC AGCAATTATA TCCTAGTTGT 
    TGTNCAGGTT GAATCCATGC ACATTGACGA AAAGTGCTTA TGCTATCACG 
    ATCTCTCTCT AAGTCTATAT ATATACTGCT CATGCAAGAA GCAATTTCGT 
    ATCAAAACAT CCTCTTCCAA TAGCTTCTAA TATTTTAACT ACAAACATTT 
    TAAGTTTCCA CTAACAATGG GTCTAATCGC CGGNAAAGTG TGTGNGTTTG 
    TTTTGGNGTN GCTTTTGGTC ACNGATTTAC TAN

AT1G04800.1

Model type
Protein coding
Short Description
glycine-rich protein
Computational Description
glycine-rich protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; Has 109132 Blast hits to 26905 proteins in 1855 species: Archae - 173; Bacteria - 37969; Metazoa - 32319; Fungi - 6881; Plants - 10265; Viruses - 1569; Other Eukaryotes - 19956 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04810.1

Model type
Protein coding
Short Description
26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit
Computational Description
26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit; FUNCTIONS IN: enzyme regulator activity, binding; INVOLVED IN: protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Proteasome/cyclosome, regulatory subunit (InterPro:IPR002015), Armadillo-type fold (InterPro:IPR016024), 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (InterPro:IPR016642); BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (TAIR:AT2G32730.1); Has 1171 Blast hits to 1071 proteins in 297 species: Archae - 14; Bacteria - 33; Metazoa - 390; Fungi - 382; Plants - 143; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink).
Link
InterPro Scan - TAIR