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Mutant Lines
15-4263-1

15-4263-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 3; Position: 1956617 [Map]; Strand: w
  - AT3G06420.1 - [+] show detail - Ubiquitin-like superfamily protein
    Distance: -220; Region: promoter
  - AT3G06430.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
    Distance: 0; Region: exon2 (3UTR)
Flanking Genome Sequence: 15-4263-1 - 5-prime edge
```
GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCT CTTGCAGAGA GAGAGAGAGA GAGATTCACA 
CACANACCGC AATCATCCTG CCGGAAGATT CTCCATCTCT TTTGTAGCAA 
CAGTGCGATC CATAAGCT
```

3 prime edge [+] show sequence

Chromosome: 3; Position: 1956601 [Map]; Strand: w
- AT3G06420.1 - [+] show detail - Ubiquitin-like superfamily protein
  Distance: -204; Region: promoter
- AT3G06430.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: exon2 (3UTR)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATATG 
TCTCACTTGA AAGAGTAGAA TAAAAGAGTT TGTAATACAC TTGATTGTTC 
TTGCAGCTAT GCGTGTTATA TATTTTGATG GGCCCAAAAT TATGAATAGA 
GGCCCATAGA TAAACTGTGA CGTGCACAAG AAATCGGACA AGTCCAAAAA 
GTGGATAAGT GCGTGTCGTC TTTCTATAAA TAATCTCTTT TCTCTCATCT 
TTTACCGTTT CTTCTCGAAC AATCAAAAAC GAACTAACCA AACATAAAAT 
TGAACACATC CTCTTCCTCT GCTCTCTGCA AACAAAAAAA CACCGATTCG 
GTCAGGAATC ATTCGTCGTG AAATCTGTAA TGGGGATTGT TGTCAAGTCT 
TTCAAGGATC AATTCTCCTC TGGTTTGTTC TTCGTTAATC TCTTTCTGAT 
TCTTTGGAAT TTTTTTTCCT TCGAAATGTG CTTCTGAAGC AAAGTTTTCA 
TCTTTGTTTG AGGATATAGA TGAGAGATTG AAGGAGTCNA ACAACATCAT 
TGCGAAATAT CCAGATAGAA TACCTGTAAG TTATTTCATA AAATTTCATG 
TTTGATTTGT TNCTTGGNGT TNCCGTCTTA NTGCCGTGCG ATTGTGGATT 
NCCCTTAGGG GTTCGAATGA TTNACTCAAT TAAAAAAAAA GTCTTCGTTT 
GACTTGCATN TNTNGAATTN CTNNAATCNC TGGTTTAATC TAAAAATTCN 
CTCCCCCATN GTTNGNTGGA ATCCNACCTG GGATNTGANA ATTNG

AT3G06420.1

Model type: Protein coding
Short Description: Ubiquitin-like superfamily protein
Computational Description: autophagy 8h (ATG8H); CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT3G15580.1); Has 1476 Blast hits to 1474 proteins in 273 species: Archae - 0; Bacteria - 0; Metazoa - 722; Fungi - 178; Plants - 301; Viruses - 3; Other Eukaryotes - 272 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G06430.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: embryo defective 2750 (EMB2750); INVOLVED IN: pollen tube development, embryo development ending in seed dormancy; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G53170.1); Has 31867 Blast hits to 12007 proteins in 283 species: Archae - 3; Bacteria - 31; Metazoa - 288; Fungi - 376; Plants - 30037; Viruses - 0; Other Eukaryotes - 1132 (source: NCBI BLink).
Link: InterPro Scan - TAIR