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15-4282-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage
Phenotype
whole plant flowering stage (PO:0007016)
  • premature (PATO:0000694)
    (Flowering & Growth::early flowering)

sporophyte vegetative stage (PO:0007134)
  • abnormal (PATO:0000460)
    (Flowering & Growth::growth defective)

seedling (PO:0008037)
  • desaturated green (PATO:0001272)
    (Seedling::pale green)

fruit (PO:0009001)
  • decreased length (PATO:0000574)
    (Fruits (Siliques)::short)

stem (PO:0009047)
  • decreased thickness (PATO:0000592)
    (Stems::thin)

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 17719938 [Map]; Strand: w
      • AT5G44040.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 15-4282-1 - 5-prime edge
    GNGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTAACGGTC TGTTCCAGTA ACCACCAACT GTTCCAATTA
    TCGGTGATTC AGGGCTTCTA CTTGGCGATT TCCTTGGCGA ATT
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 17719930 [Map]; Strand: w
      • AT5G44040.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 15-4282-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
    CTCAATGGCA ACGAACAAGT ACAGTCGAAG TTCTGAGAAC TCCAATTCCA
    CAACAGAGAA AGAATT

AT5G44040.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G04030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR