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15-4360-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1211781 [Map]; Strand: w
      • AT3G04500.1 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
        Distance: 0; Region: exon6 (3UTR)
    Flanking Genome Sequence: 15-4360-1 - 5-prime edge 
    CTGGCTAGAA ATTCCAACTC TTTCTTTACA TAACTACCAA AAAACTATGT 
    TAGATAGTAT ACATCTTCTT TCTTATAATC GATCCTTAAA TAGTAATATT 
    GATTTTCTTG TAATATGCTC AGACCACNTT GAACGTTTTA ATGGAGTGAA 
    AAAGATGTAA GAAAAGTTTG TGCTCGAGCC TATTGTGGAC ACACGTTTTC 
    ATAAAGTAAA TACCACCGGT TGGGGCTAAA GCTAAACATA GCAGCCCAAC 
    AATACATAAC CATACCGTTT TCAACAAAAC TAATGATAAT GTTTGTTCAT 
    TTATATTTAT GAGTAACAGG TTTGGAAATT TTAAGCCACA AAAATAAAAG 
    AGATCGTCAC TTGTGAAGTA TGCTCTTCTT CACAGTTTTT TGCTTCTTAT 
    TGCTGTGATG CTGCATTTAC AATCAAACAG AGAACCATCA GTTATAATCA 
    AGAATTAGAT ACTCATAAAA ATAAAATCCT TTGCAAATGT ATCTATCAAA 
    ACGTTCGAGT CAAGATACTT GCCTTTTGTC TTTCAGCAGC CTCCTGATCT 
    GTTCTCTCTT TCCAGCTACT CTTTCGTAGT TTTATCGGAC GATTTCCAAC 
    ATACTTACCT GTGTATTCAT ATGAAATCAG NGGACCAAAT CAGAATGTTC 
    AACGACAGTG ATTATAGAAC AGAATCATAT ACCANGTTCT GACAAAAACA 
    GNGAGATGAG ATATCAAGAN

AT3G04500.1

Model type
Protein coding
Short Description
RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description
RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA recognition motif-related (InterPro:IPR015464); BEST Arabidopsis thaliana protein match is: oligouridylate binding protein 1B (TAIR:AT1G17370.1); Has 13292 Blast hits to 10995 proteins in 692 species: Archae - 0; Bacteria - 989; Metazoa - 6848; Fungi - 1697; Plants - 2705; Viruses - 0; Other Eukaryotes - 1053 (source: NCBI BLink).
Link
InterPro Scan - TAIR