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15-4393-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4904129 [Map]; Strand: c
      • AT1G14345.1 - [+] show detail - NAD(P)-linked oxidoreductase superfamily protein
        Distance: 4150; Region: intergenic
      • AT1G14350.2 - [+] show detail - Duplicated homeodomain-like superfamily protein
        Distance: -3824; Region: intergenic
    Flanking Genome Sequence: 15-4393-1 - 5-prime edge 
    CCTCCACCAC ATGGGTCGTT CTCGACTCTT TATGCCATTT TGTGTGGCTT 
    TTTTTGGATC TACTGTGATT GAGAGTGAAC ATACATCTTC CATCACATCT 
    ACAATCCCAT TGGATCAATA CCTAATGCNT TTTGAAGCAC CTGTTATCTC 
    CACTAGCTCT CGGATTGTAT AAATTTGCAT AAATACTCTA TACACAATAT 
    TGATTTCCAT ATTATGTTGA GTTTATATCG ACGTCAATTT AGGAGAAATA 
    AGACTGAAAA TATATTTTAT TGACAAAAAA AAAANACNGA AANCNTNTTA 
    ANGAAATNNG CAANGGGNCC AAATAAAAAN AGGGATNGAA AATNTTNTNT 
    TTTTTCCANG GCTNNGGCCA NCCCTNNGGG GACTTNGNAG NAAANNTTTT 
    NNACCAAGNC CGGNACAANN TNGCNANATN ATNCGNCANA ANCNCAGNAA 
    ATTAAATTAA ATTAAATNAN CTAANNCATN NNCNTAANAG GGCANANATT 
    TTTNCTNACT TNGGGTNCTA AAAAAATNAA ACCTTATCCT CNTCATGAAN 
    GCANCNCTNC AATGTTTGGN CTACTTANCA TGCNTCTAAA NAAAAANAAT 
    TGACCAGGGG NGAATCCTTT TTTTATTTTT CCAACAGGGA ATCCTCNTTG 
    TTTTNTGGAC TTNTACTTAA CTAAANTTAA TCNTCGGAAT GAAATNCTTA 
    AAACCACCTN TTTTTTNGGT T

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21404089 [Map]; Strand: w
      • AT3G57780.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (T...
        Distance: -1190; Region: intergenic
      • AT3G57785.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 485; Region: intergenic
    Flanking Genome Sequence: 15-4393-1 - 3-prime edge 
    GNNNGGGGGN GGNNNNNGGN NNNNNNGNNN NNNNNNNNNN NNNNNTTNNN 
    NNNNGTTTGG GNGNGAACGA AGAATTCTTC CGNCTCGTNA NNGGCACAGG 
    GAGGTGCCNA CATAATTACA CTCATGTAGG TAGATGAAGT TTTAGAGNGN 
    CAGTATACTT CATGTCTGCT GCAGGTTCTG ATGAATAGAT TTANGAATAG 
    GNACNTGTCA CTTTGAAGAT TATTACTTGT CTGATATTNT CATTAGCCTT 
    CATTGTTGCC TTGTGAATCT TCTAGGTAAC CCTAGGTTCT GTGTTGGATC

AT1G14345.1

Model type
Protein coding
Short Description
NAD(P)-linked oxidoreductase superfamily protein
Computational Description
NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); Has 297 Blast hits to 297 proteins in 86 species: Archae - 0; Bacteria - 121; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G14350.2

Model type
Protein coding
Short Description
Duplicated homeodomain-like superfamily protein
Curator Summary
Encodes a putative MYB transcription factor involved in stomata development, loss of FLP activity results in a failure of guard mother cells (GMCs) to adopt the guard cell fate, thus they continue to divide resulting in abnormal stomata consisting of clusters of numerous guard cell-like cells. This phenotype is enhanced in double mutants with MYB88.
Computational Description
FOUR LIPS (FLP); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 88 (TAIR:AT2G02820.2); Has 8538 Blast hits to 7627 proteins in 543 species: Archae - 0; Bacteria - 2; Metazoa - 904; Fungi - 528; Plants - 5146; Viruses - 6; Other Eukaryotes - 1952 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G57780.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 3163 Blast hits to 2460 proteins in 357 species: Archae - 16; Bacteria - 291; Metazoa - 841; Fungi - 335; Plants - 248; Viruses - 72; Other Eukaryotes - 1360 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G57785.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42310.1); Has 121 Blast hits to 121 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 48; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR