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15-4416-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3477605 [Map]; Strand: w
      • AT1G10540.1 - [+] show detail - nucleobase-ascorbate transporter 8
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 15-4416-1 - 3-prime edge
    CTCACAAGTC CTCCTCCTTG GCGTAAGTTC TTCTTACATT TTTCACTAAT 
    CATTATCAAA ATTTGTGAAA ACGACTAAAG ATTTTTTCTA AACTAACCTT
    TTCTTGTTCG GATCAGCGGA GACAATACTT CTGGGGTTTC AACACTACTT
    AGTGATGCNT TGGAACAACT GTTCTCATTC CAACAATGTT AGTTTCAAAG
    ATTGATGCAA GAAACGTAAG TCTTTTGCTG AAATTTGTTA CAAGAACATA
    AGACTCTCTG GTCTTATAAA AATTCTTGTC TTTTGTCTCA AATGCAGGAA
    GATAAGGTAA AGTTGATTCA GACGTTGCTC TTTGTGTCTG GAATCAACAC
    GTTATTTCAA AGCT
  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3477721 [Map]; Strand: w
      • AT1G10540.1 - [+] show detail - nucleobase-ascorbate transporter 8
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-4416-1 - 5-prime edge
    CTTGTGAGGC AGTAAGTGAT ACCGTAAAGT TGATCCTTCA CCGGATGAGG 
    CTGAAGATCT TCCTGTTTCT GCGGTGGCTT TGCATTTTCT ACGCCATCAC
    CTGCCATTTT TTCTTATCCT TCTTCTTCCA GTGAAACCCA AAAATTCAAG
    AAAATAACTT AAAAGTGGAA GCTCAGAAAA AATAAATGGT GGAAGCT

AT1G10540.1

Model type
Protein coding
Short Description
nucleobase-ascorbate transporter 8
Computational Description
nucleobase-ascorbate transporter 8 (NAT8); FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: nucleobase-ascorbate transporter 7 (TAIR:AT1G60030.1); Has 9247 Blast hits to 9232 proteins in 1900 species: Archae - 67; Bacteria - 7567; Metazoa - 351; Fungi - 128; Plants - 453; Viruses - 1; Other Eukaryotes - 680 (source: NCBI BLink).
Link
InterPro Scan - TAIR