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15-4435-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 276984 [Map]; Strand: c
      • AT5G01730.1 - [+] show detail - SCAR family protein 4
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 15-4435-1 - 5-prime edge 
    TGCATGAGCA ACTAATGACA ACTGCAGCAC GAGGTCATGG TTTGGCGATG 
    CGTCTCCAAC ACCTCGAAGC AGACTTCCCT TCAGTTGAGA TACCCATTCT 
    CTCTCAAACC GATCATTCTA CATTCTTTTA TGAGCCAGGC CAGTCATCTA 
    TCTTACTCTA ATGTTTAGTA TAAGAGATAT AAGCTGCTAT TGGTGATCCC 
    AAGCACTGAA TTGTTAGTTA GGTCCTCAGG CTTGGAATGG CATTCTGATC 
    TGCAAACAAA AGAAGACTTG ATTTCCCCAC GGAACTTGCC TCGTTGTATA 
    ATGGATTCGT ACGAGGAATG CCATGGTCCG CCGCAGCTTT TCCTTCTCGA 
    CAAGTACATT TCAGTATATC ATGAGAATTT TCACCATAAG GAAATATCCA 
    TTTGCAGTTT TTAATCATGT TTCTGCTGTT ATTCAGGTTT GATGTTGCTG 
    GGTCTGGATC ATGCTTGAAG CGTTACTCTG ATCCATCTTT ATTGAAGACA 
    CATACTACAT CAGCAGTAGT AGCAACATCC AAACTCGGGA AAGATAAGCG 
    ACTACGTCAA TCAAAGGTAT TCAATCATGT TACACATTTC CTAATTCTGG 
    TTTTACTATG CCCACTCTGC CACTGTCTGT AAAAATAAGC ATCTGAAAAA 
    TGCACATTTG GGTATTATGT GTTACATATG ATCAAATCTA TTTCAAATAC 
    AGAANAAAGG ATCTCACACA CCTNTTAAGA GAG

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 277100 [Map]; Strand: c
      • AT5G01730.1 - [+] show detail - SCAR family protein 4
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 15-4435-1 - 3-prime edge 
    CTCATGCAGG CAATGGAATA CCTCAGCAGC AAACCTTATT AGTATGAAAA 
    GAGACAAAAG AACATAAATG CCAAGGGATT GATTCCATAG CGACATAGAG 
    GTTTCATTAG AATTAGATAA CCAAAAGAAG AAAAATCATC TCATCAGCAC 
    ACAAGAAACT TGAACTACAC CGAATAAGAT TTTTAAGCAA AAAACAAAGA 
    GACCACCCTA GATTCAGGTT TTCTCTAGAT TCAGAGTATA TAGCATCGAA 
    ATTCAATTCC ACGGAACCTT CAGTGTCCCA TTCTCTACAG TAAAATTCCT 
    CAAACGGTAG GGTATATTGG ACCGAAATTG AATTAAAAAA AAAAAAAAAA 
    AAANNTTNNN NAANNGGGGN CCNANGGGGG NCNAAANCCC CNAAAAANCC 
    CCCNNGGGNN NNNTTTTAAA AAAAATTTNN NNCCNGGGGN NGGAANCCCC 
    NGGGGCCCCT T

AT5G01730.1

Model type
Protein coding
Short Description
SCAR family protein 4
Curator Summary
Encodes a member of the SCAR family.These proteins are part of a complex (WAVE) complex.The SCAR subunit activates the ARP2/3 complex which in turn act as a nucleator for actin filaments.
Computational Description
SCAR family protein 4 (SCAR4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: positive regulation of actin nucleation; LOCATED IN: SCAR complex, chloroplast, plastoglobule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: SCAR homolog 2 (TAIR:AT2G38440.1); Has 1330 Blast hits to 874 proteins in 188 species: Archae - 2; Bacteria - 349; Metazoa - 454; Fungi - 169; Plants - 213; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink).
Link
InterPro Scan - TAIR