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15-4440-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
fruit (PO:0009001)
  • decreased length (PATO:0000574)
    (Fruits (Siliques)::short)
stem (PO:0009047)
  • decreased length (PATO:0000574)
    (Branching::short internode)

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3756795 [Map]; Strand: c
      • AT1G11210.1 - [+] show detail - Protein of unknown function (DUF761)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-4440-1 - 5-prime edge 
    GCCACGGCTA TGCATCTAAA GGTTATTGTT CCTGTGGCTA TGGATTTCTC 
    ACAAAATCCG ATTATTTTGA GCTCTTTCCT CACGTGGCTG AAACCGCCGT 
    ATCTTTACGT CATCACTAAC NGTCATCATC ATCNGTTGTC GGAGTTTCCT 
    ACCGGATTAC TACTGTCTCC AGCCACGTCG ACGGCAAAGA CTATGAGGCT 
    TCTTACAGTG GCGACAATAA GTTTCAGACT GATCATCAGC AGATCGTCCA 
    AGAAGCTCCT CTAAGGCGAC GAACGGAGAC GAAAGATGCG GATTTTGGTT 
    TCATCGGCAA AGTTTTGCAG ATCGTTAAGG AGCCGGAGGT TGTGTATGAA 
    GAGAAGGAGA GGCCGGCGAC GGTAGAGGAG GAGGAGAAGA AGTGTATAAT 
    TGTGGTGAGC AAATCGGAAA ATCAACCTCC GGTGGAGAAG CCTCTTGTTA 
    CGGCTAGGAT CGGCCAAAAG AAACCGGTGG TTAAGACTAC ACCAGCAGGT 
    AATTTAATTT AGATATTTAA TCACTAAGGT GACGTCATCC GAATTTAGAT 
    ATTTTATAAA ACACTATTTG TTAAAAGGTT AATTTCGTAA TTTTTCAGAA 
    AGGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3756911 [Map]; Strand: c
      • AT1G11210.1 - [+] show detail - Protein of unknown function (DUF761)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-4440-1 - 3-prime edge 
    GCCGTGGCTA CGACGCCAGT AGAGATTAGC ACCGCTTTCA TCCACGACGC 
    CATTTTCTCG ACTATATCAC TGTTACTCTC TCTATCTCTT GATATTTATC 
    TGAGTGTGAT ATTGTTGTGA CGCTCTTAAG TCTTAGCTCT GACTCTATTA 
    TTCTTTCTTT CGGTTTATAT AGAAAGCTAT GAGAGGGGAC AATGAGATAG 
    CTGATACATA CCGTTGGATC TAAGAATAGA GACATGAACG GTCAGGATTG 
    TTTTGGGGCA GTAGATGCAT CCTCTTGTAT AAACAAAACA AGAGTAGAGA 
    ATAAACCCTT TTTTTTGTTG TTGTTTATGT CTTATTGAAT ATTGACACGT 
    ACTCTAAGCT

AT1G11210.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF761)
Computational Description
Protein of unknown function (DUF761); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761, plant (InterPro:IPR008480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF761) (TAIR:AT1G11220.1); Has 74 Blast hits to 74 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR