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15-4448-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7921129 [Map]; Strand: w
      • AT1G22430.1 - [+] show detail - GroES-like zinc-binding dehydrogenase family protein
        Distance: 0; Region: intron7 (CDS)
      • AT1G22430.2 - [+] show detail - GroES-like zinc-binding dehydrogenase family protein
        Distance: 0; Region: intron7 (CDS)
    Flanking Genome Sequence: 15-4448-1 - 5-prime edge
    GAGTTGACTA TAGTTTCGAA TGCGTTGGCT TAGCTTCTTT ACTTAACGAG 
    GCTTTCATCA GTACCCGCAC GGTACGCTTA AACCGGATCA TACCGAATCT
    TAGTCAATTG AGTATATCAT TCTAATGGTT AGTCAAAATT GGCTCTATAT
    ATATAAATAA AAATCAGGGA ACAGGTAAAA CTGTAATGTT GGGGATGGAG
    AAGCATGCAG CGCCAATTAG TTTGGGTAGT TTTGATCTTT TAAGANGCAG
    AGTTATTTGC GGAAGCT

AT1G22430.1

Model type
Protein coding
Short Description
GroES-like zinc-binding dehydrogenase family protein
Computational Description
GroES-like zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT4G22110.2); Has 33980 Blast hits to 33961 proteins in 3177 species: Archae - 763; Bacteria - 21520; Metazoa - 1242; Fungi - 2509; Plants - 4182; Viruses - 3; Other Eukaryotes - 3761 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G22430.2

Model type
Protein coding
Short Description
GroES-like zinc-binding dehydrogenase family protein
Computational Description
GroES-like zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT4G22110.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR